Gene symbol
|
GO term
|
Average fold changes
|
---|
DC_L
|
DC_D
|
Mø_L
|
Mø_D
|
---|
ATF3
|
RT
|
9.8 ± 1.1a, b
|
6.1 ± 0.5a, b
|
8.5 ± 0.6a
|
6.7 ± 1.2a
|
BIRC3
|
CD
|
64.0 ± 15.1a
|
51.0 ± 8.7a
|
81.3 ± 17.1a
|
60.0 ± 9.0a
|
Bt.17514 (TNFAIP3)
|
IR, CD
|
53.1 ± 9.8a
|
43.1 ± 5.7a
|
51.8 ± 12.7a
|
59.2 ± 14.3a
|
Bt.19462 (CCL5)
|
IR, CD
|
641.0 ± 184.5a, b
|
403.3 ± 90.9a, b
|
443.5 ± 133.6a, b
|
270.9 ± 81.0a, b
|
CSF2
|
IR, CD
|
182.0 ± 21.1a, b
|
119.3 ± 26.3a, b
|
257.2 ± 98.5a
|
198.2 ± 78.9a
|
CSF3
|
IR
|
308.9 ± 92.0a
|
558.2 ± 243.3a
|
633.8 ± 135.1a
|
548.3 ± 93.2a
|
CXCL2
|
IR
|
260.6 ± 38.2a, b
|
147.1 ± 24.4a, b
|
521.6 ± 159.7a, b
|
209.9 ± 46.0a, b
|
ETS1
|
RT, CD
|
0.9 ± 0.5
|
0.5 ± 0.5
|
0.2 ± 0.6
|
0.0 ± 0.6
|
FOSB
|
RT
|
3.8 ± 0.9a, b
|
1.5 ± 0.9b
|
4.2 ± 1.1a, b
|
1.6 ± 0.6a, b
|
HHEX
|
RT
|
−6.0 ± 1.3a, b
|
−9.9 ± 2.4a, b
|
−8.4 ± 1.0a
|
−9.8 ± 2.5a
|
ID1
|
RT, CD
|
71.2 ± 25.6a
|
102.1 ± 39.2a
|
103.0 ± 53.3a, b
|
77.2 ± 42.7a, b
|
ID2
|
RT
|
3.1 ± 0.6a, b
|
1.5 ± 0.6b
|
2.6 ± 0.1a
|
2.2 ± 0.3a
|
ID3
|
RT, CD
|
−2.2 ± 0.3a
|
−2.4 ± 0.2a
|
−1.9 ± 0.2a
|
−2.4 ± 0.3a
|
IFNG
|
IR, CD
|
589.3 ± 190.5a, b
|
25.1 ± 12.0a, b
|
22.0 ± 9.2a, b
|
2.1 ± 0.8b
|
IL1B
|
IR, CD
|
1850.1 ± 415.0a
|
1353.8 ± 333.5a
|
3248.0 ± 1069.1a
|
2048.6 ± 611.3a
|
IL6
|
IR, CD
|
79.5 ± 20.7a
|
77.9 ± 31.2a
|
171.1 ± 89.3a
|
97.7 ± 37.9a
|
IL10
|
IR, CD
|
69.5 ± 20.4a
|
107.3 ± 31.8a
|
125.7 ± 44.6a
|
112.2 ± 18.6a
|
IL12B
|
IR, CD
|
17 044.3 ± 16 476.7a, b
|
34 218.1 ± 32 873.8a, b
|
2591.0 ± 1834.2a
|
3340.4 ± 1966.5a
|
ISG15
|
IR
|
304.8 ± 57.8a, b
|
165.7 ± 28.0a, b
|
120.0 ± 48.2a, b
|
46.8 ± 19.0a, b
|
JUNB
|
RT
|
15.2 ± 4.1a, b
|
7.4 ± 0.9a, b
|
12.2 ± 1.0a, b
|
8.7 ± 1.0a, b
|
KLF5
|
RT
|
9.0 ± 0.8a
|
9.4 ± 1.3a
|
8.7 ± 1.5a
|
9.1 ± 1.4a
|
KLF13
|
RT
|
−2.9 ± 0.5a
|
−2.7 ± 0.3a
|
−3.1 ± 0.2a
|
−2.5 ± 0.3a
|
LIG4
|
RT, CD
|
2.9 ± 0.3a
|
4.0 ± 0.5a
|
3.2 ± 0.3a, b
|
4.9 ± 0.5a, b
|
MEFV
|
IR
|
82.0 ± 27.7a
|
111.6 ± 15.8a
|
76.5 ± 14.3a, b
|
140.1 ± 16.2a, b
|
MYC
|
RT, CD
|
−0.5 ± 0.8b
|
−2.3 ± 0.5a, b
|
−0.9 ± 0.6
|
−1.7 ± 0.2a
|
NR4A2
|
RT, CD
|
4.4 ± 0.8a, b
|
1.1 ± 0.5b
|
2.6 ± 0.2a
|
1.9 ± 0.3a
|
PLEKHF1
|
CD
|
−5.2 ± 0.7a
|
−4.1 ± 0.6a
|
−3.8 ± 0.6a
|
−3.2 ± 0.3a
|
TNF
|
IR, CD
|
353.7 ± 104.3a
|
368.6 ± 58.0a
|
551.6 ± 282.1a
|
452.5 ± 171.5a
|
TNFAIP6
|
IR
|
683.3 ± 301.9a
|
927.7 ± 377.9a
|
9115.6 ± 5564.9a
|
9148.4 ± 6115.0a
|
TXNIP
|
IR, RT, CD
|
2.2 ± 0.8a, b
|
1.8 ± 0.7b
|
3.0 ± 0.3a, b
|
0.9 ± 0.5b
|
YWHAB
|
RT, CD
|
−1.3 ± 0.1a
|
−0.8 ± 0.4
|
−0.4 ± 0.5
|
−1.1 ± 0.0a
|
- The results are expressed as the average fold change in mRNA levels in DC treated with live (DC_L) and inactivated (DC_D) S. Typhimurium and Mø treated with live (Mø _L) and inactivated (Mø _D) S. Typhimurium compared to the uninfected DC or Mø ± standard errors.
-
aIndicates when the mean fold change values were significantly different from resting cells by t test corrected for multiple testing (Benjamini–Hochberg) (P < 0.05).
-
bDenotes when the mean fold change measured in DC and/or Mø is significantly different in the response to live and inactivated Salmonella by t test corrected for multiple testing (Benjamini–Hochberg) (P < 0.05). The GO term column indicates which of the three major GO terms the gene is associated with; inflammatory response (IR), regulation of transcription (RT) and regulation of programmed cell death (CD).