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Table 8 Top 10 differentially abundant Amplicon Sequence Variants (ASVs) in the pars oesophagea associated with meal feed. p-values are unadjusted, but the threshold for 5% False Discovery Rate (FDR) was estimated at 0.013

From: The role of Helicobacter suis, Fusobacterium gastrosuis, and the pars oesophageal microbiota in gastric ulceration in slaughter pigs receiving meal or pelleted feed

ASV taxonomy

logFC

logCPM

p-value

s__Clostridium sensu stricto 1

−0.46

8.23

0.000139

s__Lactobacillus

1.43

11.03

0.000425

s__Clostridium sensu stricto 1

−0.41

8.06

0.000601

s__Terrisporobacter

0.31

9.57

0.000760

s__Terrisporobacter

0.27

10.09

0.000929

s__Clostridium sensu stricto 1

−0.41

8.15

0.00101

s__Lactobacillus

1.36

11.26

0.00103

s__Lactobacillus

1.32

11.07

0.00104

s__Lactobacillus

1.32

11.90

0.00113

s__Lactobacillus

1.36

10.97

0.00115

  1. Full table is available in Additional file 2.