Table 1 The RNA-Seq results showing average number of reads (M), aligned reads (%) and mapped reads (% assigned, multimapped, no feature (= no intersection with the bovine genome annotation) per treatment group
Group | Avg. raw/trimmed reads (M reads) | Avg. aligned reads (in %) | Avg. assigned/multimapped/NoFeature (in %) |
|---|---|---|---|
CTRL 0Â h | 77.6/77.0 | 70.0 | 52.91/14.13/9.18 |
CTRL 3Â h | 81.8/81.1 | 66.0 | 46.01/18.73/10.2 |
CTRL 24Â h | 88.7/88.0 | 69.0 | 49.62/17.93/9.71 |
E. coli 3Â h | 101.8/101.0 | 71.1 | 52.62/14.75/10.15 |
E. coli 24Â h | 82.0/81.3 | 71.4 | 52.0/18.79/9.07 |