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Table 2 Estimated selection pressures for the studied VGs in 19 S. suis isolates.

From: Genomic and phenotypic analysis of invasive Streptococcus suis isolated in Spain reveals genetic diversification and associated virulence traits

Gene

Estimated dN/dS

Number of codon sites with significant selection pressure

epf

0.33 (0.27–0.40)

–

sly

0.05 (0.00–0.25)

–

mrp

0.33 (0.30–0.37)

9 NSSs

hylA

0.49 (0.40–0.60)

1 NSSs

htpsC

0.32 (0.22–0.46)

2 NSSs

zmp

0.24 (0.23–0.26)

64 NSSs

ofs

2.35 (2.17–2.54)

1 NSSs

sbp2

–

–

strF

0.33 (0.08–0.87)

–

sspA

0.82 (0.73–0.92)

12 NSSs

SSU1773

0.24 (0.22–0.27)

50 NSSs

apuA

0.10 (0.09–0.12)

130 NSSs

dppIV

0.15 (0.13–0.17)

52 NSSs

  1. The table shows the estimated global dN/dS (including the 95% confidence interval) and the number of negatively selected codon sites (NSSs) at a significance level of 0.05. Positively selected sites at that significance level were not found. The gene sbp2 was totally conserved.