Reference | Subtype | Model | Transmission rate \({\varvec{\beta}}\) | Reproduction number |
---|---|---|---|---|
Within-farm transmission | ||||
 [35] | HP/H5N1 | PBM/FD | Min: 0.60 (0.43–0.84) Max: 2.30 (1.92–2.76) | Min: 2.18 (1.94–2.46) Max: 3.49 (2.70–4.50) |
 [57] | HP/H5N2 | PBM/FD | 3.2 (2.3–4.3) | 12.8 (9.2–17.2) |
 [62] | HP/H5N8 | PBM/FD | Min: 0.95 (0.3–2.3) Max: 34.4 (27.3–44.1) | Min: 5.225 (1.65–12.65) Max: 86 (68.25–110.25) |
 [64] | HP/H5N8 | PBM/FD | 4.1 (2.8–5.8) | 17.5 (9.4–29.3) |
 [65] | HP/H5N8 | PBM/FD | Min: 0.661 (0.627–0.696) Max: 3.387 (1.774–2.071) | Min: 2.642 (2.507–2.785) Max: 13.548 (12.832–14.304) |
 [73] | HP/H7N7 | PBM/FD | 4.50 (2.68–7.57) | – |
 [74] | HP/H7N7 | IBM/FD | 1.9 (0.61–8.1) | 7.6 (2.44–32.4) |
 [76] | LP/H5N2 | PBM/FD | Min: 0.6 (0.4–1.0) Max: 3.9 (1.2–5.8) | Min: 7.068 (4.712–11.78) Max: 45.942 (14.136–68.324) |
 [77] | LP/H7N3 | PBM/FD | Min: 0.50 (0.45–0.55) Max: 0.72 (0.68–0.77) | Min: 4.7 (3.0–8.6) Max: 5.6 (4.3–7.7) |
Between-farm transmission | ||||
 [38] | HP/H5N1 | IBM/DD | 0.99 (0.76–1.12) × 10–6 | – |
 [41] | HP/H5N1 | PBM/DD | Min: 1.4 × 10–8 Max: 40 × 10–8 | Min: 0.55 Max: 15.7 |
 [42] | HP/H5N1 | IBM/DD | 0.429 (probability) | – |
 [43] | HP/H5N1 HP/H5N8 HP/H5N6 | PBM/DD | – | Min: 0.03 (0–0.98) Max: 2.20 (1.51–3.16) |
HP/H5N1 | IBM/DD | Min: 1.71 (0.586–3.63) × 10–10 Max: 1.06 (0.0729–3.78) × 10–7 | – | |
 [48] | HP/H5N1 | PBM/FD | Min: 0.08 (0.06–0.10) Max: 0.11 (0.08–0.20) | Min: 0.85 (0.77–1.02) Max: 0.96 (0.72–1.20) |
 [56] | HP/H5N2 | IBM/DD | 0.0061 (0.0025–0.0137) | – |
 [59] | HP/H5N6 | IBM/DD | 0.0012 (0.0001–0.1) | – |
 [60] | HP/H5N6 HP/H5N8 | IBM/DD | Min: 0.00007–Max: 0.00707 | – |
 [63] | HP/H5N8 | IBM/FD | Min: 0.23 (0.16–0.31) Max: 0.53 (0.37–0.72) | – |
 [67] | HP/H7N1 | IBM/DD | Min: 0.0009 (0.0005–0.0013) Max: 0.0155 (0.0078–0.0232) | – |
 [68] | HP/H7N3 | PBM/DD | Min: 0 – Max: 0.00238 | 4.8 |
 [69] | HP/H7N7 | PBM/DD* | Min: 0.17 (0.1–0.2) Max: 0.47 (0.3–0.7) | Min: 1.2 (0.6–1.9) Max: 6.5 (3.1–9.9) |
 [70] | HP/H7N7 | IBM/DD | Min: 0.076 Max: 0.336 | – |
 [71] | HP/H7N7 | IBM/DD | 0.002 (0.0012–0.0039) | – |
 [72] | HP/H7N7 | PBM/DD | 1.7 (1.5–2.0) × 10–4 | 1.33 |
 [74] | HP/H7N7 | IBM/DD | 0.0039 (0.0023–0.0076) | – |