Table.1 PRV-1 isolates sequenced in the study
Name | Sample date | Prod. zone | Organ | Ct-value | Sequencing method | Accession number |
|---|---|---|---|---|---|---|
NOR2019 V-AGD-1737m | 02.09.19 | 1 | Heart | 28.1 | Amplicon | MW831860–MW831864 |
NOR2019 ROG-1666m | 09.07.19 | 2 | Heart | 22.0 | Amplicon | MW831785–MW831789 |
NOR2016 ROG-1661s | 27.09.16 | 2 | Heart | 23.9 | Amplicon | MW831680–MW831684 |
NOR2019 ROG-1751m | 28.01.19 | 2 | Heart | 28.9 | Amplicon | MW831790–MW831794 |
NOR2019 HRD-1523m | 19.02.19 | 3 | Heart | 16.5 | Amplicon | MW831690–MW831694 |
NOR2019 HRD-1525m | 12.11.19 | 3 | Heart | 20.1 | Amplicon | MW831715–MW831719 |
NOR2019 HRD-1744m | 08.01.19 | 3 | Heart | 28.8 | Amplicon | MW831725–MW831729 |
NOR2019 SFJ-1674m | 06.08.19 | 4 | Heart | 27.4 | Amplicon | MW831795–MW831799 |
NOR2017 SFJ-1660s | 27.03.17 | 4 | Kidney | 23.4 | Amplicon | MW831685–MW831689 |
NOR2019 HRD-1743m | 23.09.19 | 4 | Heart | 21.8 | Amplicon | MW831720–MW831724 |
NOR2019 SFJ-1745m | 04.07.19 | 4 | Heart | 28.8 | Amplicon | MW831805–MW831809 |
NOR2019 SFJ-1736m | 07.03.19 | 4 | Heart | 28.1 | Amplicon | MW831800–MW831804 |
NOR2019 MRO-5075s | 10.09.19 | 5 | Kidney | 20.6 | Amplicon | MW831740–MW831744 |
NOR2019 MRO-5072s | 21.03.19 | 5 | Heart | 18.6 | WGS | MW831735–MW831739 |
NOR2019 MRO-5088m | 08.08.19 | 5 | Heart | 20.4 | WGS | MW831750–MW831754 |
NOR2019 TRL-1675m | 08.01.19 | 6 | Heart | 26.5 | Amplicon | MW831815–MW831819 |
NOR2019 MRO-1665m | 30.01.19 | 6 | Heart | 22.2 | Amplicon | MW831730–MW831734 |
NOR2019 MRO-5087m | 30.01.19 | 6 | Heart | 18.6 | WGS | MW831745–MW831749 |
NOR2019 TRL-1765m | 13.06.19 | 6 | Heart | 30.5 | Amplicon | MW831820–MW831824 |
NOR2019 TRL-1664m | 18.07.19 | 7 | Heart | 23.8 | Amplicon | MW831810–MW831814 |
NOR2019 TRL-5070s | 12.07.19 | 7 | Heart | 16.4 | WGS | MW831825–MW831829 |
NOR2019 TRL-5091m | 09.04.19 | 7 | Heart | 17.4 | WGS | MW831830–MW831834 |
NOR2019 NRL-5078m | 20.03.19 | 8 | Heart | 20.5 | Amplicon | MW831780–MW831784 |
NOR2019 NRL-1750m | 11.07.19 | 8 | Heart | 29.1 | Amplicon | MW831765–MW831769 |
NOR2019 NRL-1676m | 16.05.19 | 9 | Heart | 21.7 | Amplicon | MW831755–MW831759 |
NOR2019 NRL-1742m | 21.08.19 | 9 | Heart | 21.4 | Amplicon | MW831760–MW831764 |
NOR2019 NRL-5071s | 12.08.19 | 9 | Kidney | 16.7 | WGS (Amplicon L1) | MW831770–MW831774 |
NOR2019 NRL-5073s | 09.04.19 | 9 | Kidney | 18.8 | WGS | MW831775–MW831779 |
NOR2019 TRO-1677m | 07.05.19 | 10 | Heart | 26.3 | Amplicon | MW831840–MW831844 |
NOR2019 TRO-5077m | 09.10.19 | 10 | Heart | 19.6 | WGS (Amplicon L1 + L2) | MW831850–MW831854 |
NOR2019 TRO-1662s | 14.10.19 | 11 | Kidney | 24.9 | Amplicon | MW831835–MW831839 |
NOR2019 TRO-5089m | 04.07.19 | 11 | Heart | 15.9 | WGS | MW831855–MW831859 |
NOR2019 TRO-1735m | 07.02.19 | 11 | Heart | 27.6 | Amplicon | MW831845–MW831849 |
NOR2019 FNM-5090m | 10.08.19 | 12 | Heart | 15.4 | WGS (Amplicon L1) | MW831710–MW831714 |
NOR2019 FNM-1527m | 10.04.19 | 12 | Heart | 20.9 | Amplicon | MW831695–MW831699 |
NOR2019 FNM-1642s | 25.04.19 | 12 | Kidney | 25.4 | Amplicon | MW831700–MW831704 |
NOR2019 FNM-1817m | 18.02.19 | 12 | Heart | 17.2 | Amplicon | MW831705–MW831709 |