Skip to main content

Table 1 Primer sequences used in this study

From: Identification and functional characterization of a fish-specific tlr19 in common carp (Cyprinus carpio L.) that recruits TRIF as an adaptor and induces ifn expression during the immune response

Primer name

Primer sequence (5′–3′)

Usage

TLR19-F

TGCATCGATGCTGAGTCGCTG

tlr19 cloning

TLR19-R

GGCAGAGCTTCTCCATTGTGGCCA

tlr19 cloning

TLR19-5′outer

AGCGAGCAAAGCGATAACCAGCGG

5′RACE

TLR19-5′inner

GCGATAACCAGCGGCTGCCAACAG

5′RACE

TLR19-3′outer

GGAACAAGGGAACCCGAGACTGA

3′RACE

TLR19-3′inner

GAGAGTATCCACAGCAGTCAGTGC

3′RACE

TLR19-NI-F

ACATCCTGCAGGAATGGGTGTGCATGACTCC

Plasmid construction

TLR19-SI-R

CTAGCTAGCTCAAGAAGCTTCCGCGTC

Plasmid construction

TLR19-EI-F

CGGAATTCATGGGTGTGCATGACTCC

Plasmid construction

TLR19-SI-R

GGATTCCCTCAAGAAGCTTCCGCGTC

Plasmid construction

rtTLR19-F

GCCGCTGGTTATCGCTTTGCT

Real-time PCR

rtTLR19-R

ATCCTCCTGTGCCACTGCCTAC

Real-time PCR

rtS11-F

CCGTGGGTGACATCGTTACA

Real-time PCR

rtS11-R

TCAGGACATTGAACCTCACTGTCT

Real-time PCR

Rab5-F

CCCAAGCTTATGGCAGGAAGAGGCGGA

Plasmid construction

Rab5-R

CGGGGTACCGTGTTGCTACAGCGGGACC

Plasmid construction

Rab7-F

CCCAAGCTTATGACATCAAGGAAGAAAGTTC

Plasmid construction

Rab7-R

CGGGGTACCGTGCAGCTACAAGTCTCTGC

Plasmid construction

TRIF-F

CCCAAGCTTCGCCACCATGGCAGATGGTGGAGTAGAG

Plasmid construction

TRIF-R

CGCGGATCCCGAGAATCAAACCCATTGGGCGAG

Plasmid construction

MyD88-F

CCCAAGCTTCGCCACCATGGCATCAAAATCAAGTATAGAC

Plasmid construction

MyD88-R

CGCGGATCCCGTTGAAAAGATCGGGGCAGTGC

Plasmid construction

TIRAP-F

CCCAAGCTTCGCCACCATGGAGGAAGACGCGTCAG

Plasmid construction

TIRAP-R

CGCGGATCCCGGCCGTCAGATTGAGATGCAC

Plasmid construction

EPC-ifn-1-F

ATGAAAACTCAAATGTGGACGTA

Real-time PCR

EPC-ifn-1-R

GATAGTTTCCACCCATTTCCTTAA

Real-time PCR

EPC-Viperin-F

AGCGAGGCTTACGACTTCTG

Real-time PCR

EPC-Viperin-R

GCACCAACTCTCCCAGAAAA

Real-time PCR

EPC-β-actin-F

GCCGTGACCTGACTGACTACCT

Real-time PCR

EPC-β-actin-R

GCCACATAGCAGAGCTTCTCCTTG

Real-time PCR