Table 3 Amino acids in EtMIC-bc1 protein and in peptide A, D and W that predicted for forming hydrogen-bonds.
From: Specific EtMIC3-binding peptides inhibit Eimeria tenella sporozoites entry into host cells
peptide | Hydrophobic amino acids | Amino acids for forming hydrogen-bonds in | Number of hydrogen-bonds | Common amino acids in peptide that contribute for forming hydrogen-bonds between peptides | ||||
|---|---|---|---|---|---|---|---|---|
peptides | EtMIC-bc1 protein | A and D | A and W | D and W | A, D and W | |||
A | A1, L4, L5, M9, L11, V12 | A1, R3, L5, T6 T8, S10, L11, V12 | G217, S216, C215, V204, T213, R175, A206, D207, N208, Q145, R229, M172 | 12 | Q145, M172, R175 | V204, T213, D207 | / | R175 |
D | Y2, L7, L10 | D1, H3, D4, Y2, T9 | M172, R175, A174, D149, F151, Q145, A143 | 9 | Q145, M172, R175 | / | R175 | R175 |
W | W1, V4, A7, W8 L9, L10 | D3, V4, H5, K6, A7, E11 | V204, R175, T213, D207, E142 | 6 | / | V204, T213, D207 | R175 | R175 |