Table 1 Number of reads of all bases detected using RNA-seq in DPV-infected and control ducks
Library | Number of raw reads | Number of clean reads | Number of uniquely mapped reads | Percentage of reads mapped (%) |
|---|---|---|---|---|
CHv-1 | 61 196 398 | 58 437 658 | 35 429 191 | 60.63 |
CHv-2 | 61 868 452 | 59 080 194 | 35 273 016 | 59.7 |
CHv-3 | 69 529 094 | 66 485 428 | 40 823 382 | 61.4 |
CHa-1 | 63 045 260 | 60 281 664 | 36 842 779 | 61.12 |
CHa-2 | 61 100 482 | 58 372 142 | 36 312 302 | 62.21 |
CHa-3 | 68 613 194 | 65 544 842 | 40 272 899 | 61.44 |
Control-1 | 64 108 500 | 61 235 756 | 37 298 283 | 60.91 |
Control-2 | 60 808 456 | 58 101 298 | 35 789 540 | 61.6 |
Control-3 | 60 864 474 | 57 959 378 | 35 637 789 | 61.49 |
Total | 571 134 310 | 545 498 360 | 333 679 181 |