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Table 1 Bacterial strains, plasmids and primers used in this study

From: Lack of a type-2 glycosyltransferase in the fish pathogen Flavobacterium psychrophilum determines pleiotropic changes and loss of virulence

Plasmid, bacterial strain or primer

Description or sequence

Source or reference

Plasmidsa

  

pEP4351

Ori R6K dependent protein pir,; RP4 oriT; Cmr Tcr (Emr); Tn4351 vector transfer.

[39]

pCP23

ColE1 ori, (pCP1 ori), Apr (Tcr), E. coliF. psychrophilum shuttle plasmid

[40]

pCP23-fpgA

FP1638 gene, derived from pCP23.

This study

pCP23-Gfpp2

pCP23-G carrying fpp2-fpp1 promoter

[41]

Bacterial strains

  

F. psychrophilum

  

THC02/90

Wild-type.

[42]

fpgA

FP1638 mutant created by Tn4351 transposition.

This study

fpgA+

Mutant ΔFP1638 carrying pCP23-FP1638 plasmid, complemented strain.

This study

THC02/90-G

THC02/90 strain carrying pCP23-G plasmid

[41]

THC02/90 -fpp2

THC02/90 strain carrying pCP23-Gfpp2 plasmid

[41]

fpgA -fpp2

ΔFP1638 strain carrying pCP23-Gfpp2 plasmid

[41]

E. coli

  

S17-1 λpir

λpir hsdR pro thi; RP4-2 Tc::Mu Km::Tn7

[34]

BW19851

RP4-2tet::Mu-1kan::Tn7 integrant; _uidA::pir_ recA1 hsdR17 creB510 endA1 zbf-5 thi

[35]

Primersb

  

26-F

5′ACTGGGATCCAGTTTTAAGCCCGCAAA 3′

This study

26-R

5′ ACTGCTGCAGCAATGAACTTCGTCTTG 3′

This study

TN-1

5′ GGACCTACCTCATAGACAA 3′

[19]

IS4351-F

5′ TCAGAGTGAGAGAAAGGG 3′

[19]

promfpp2-F

5′ ATCAGGATCCGAGCACTACACTTTCTAGA 3′

[41]

promfpp2-R

5′ GATTGGATCCTGTTCGGTAGTGTAGCA 3′

[41]

  1. aAntibiotic resistance phenotypes: ampicillin, Apr; tetracycline, Tcr; erythromycin, Emrb. Antibiotic resistance phenotypes and other features listed in parentheses are those expressed by F. psychrophilum but not by E. coli.
  2. bRestriction sites for cloning are in bold.