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Table 2 Primers used for SNP identification of five suspected FIP-associated SNPs in Birman cats

From: Polymorphisms in the feline TNFA and CD209 genes are associated with the outcome of feline coronavirus infection

SNP name

Chr-SNP positiona

Orientationb

Sequence (5′ - 3′)

TAc

Amplicon size

A1.196617776

A1-154265118

F

GGCAGTCAGAGAATGAGACAC

61 °C

337 bp

  

R

TTGCCAGTTCTGCAGATTG

  

A1.206840008

A1-164728174

F

AGGTGAAGTGTTGTGTGCAT

61 °C

388 bp

  

R

ATGTTCTGCTAGATGAGCCG

  

Un.59861682

A1-155715831

F

CTCATCCCAGTTGATCACAC

61 °C

230 bp

  

R

TTCCTCCTGGAAAACCCT

  

A2.191286425

A2-126618108

F

AGCGTATCAAGTGCCTGC

61 °C

299 bp

  

R

CCTTCCTGTTTAGGTGCTTG

  

E2.65509996

E2-54165589

F

CGCTTCAGTTTCCTTTCCAG

61 °C

417 bp

  

R

TCTGAGCCTTGGTCTTCTG

  
  1. aChr: chromosome.
  2. bF: forward; R: reverse.
  3. cAnnealing temperature.