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Table 4 Top bio functions identified by ingenuity pathway analysis, from the Affymetrix ovine gene array.

From: Exploring the abomasal lymph node transcriptome for genes associated with resistance to the sheep nematode Teladorsagia circumcincta

a. R vs. C comparison

DISEASES AND DISORDERS

P-value

Immunological Disease

 

CSF3R, SELE, PTGDR2, IL1RL1, IGHE, VIPR2, CCL23, NR1H4, IL13RA2, CCL17, CCL22, IL13, ADRA1D, HRH1, IL17RB, CCR4, CCL2, NLRP12, CD1A, CCL26, CFH,HRH4, CYSLTR2, FCER2.

2.73 × 10-13 - 6.71 × 10-03

Inflammatory Response

 

GATA1, CRLF2, NR1H4, VIPR2, IL1RL1, IL13RA2, SOCS2, P2RX1, CCL17, SLC9A4, CCL22, HRH1, NFIL, TFF2, CCL2, CD1A, HPGD, CFH, CYSLTR2, FCER2, CSF3R, ALOX15, SELE, PTGDR2, IL5RA, CCL23, IGHE, CD200R1, CD1B, ULBP1, P2RX7, IL13, IL17RB, CCR4, NT5E, NLRP12, PILRA, CCL26, IGHA1, SH2D1B, HRH4.

8.34 × 10-13 - 6.71 × 10-03

Hypersensitivity Response

 

ALOX15, PTGDR2, SELE, IL5RA, GATA1, VIPR2, IL1RL1, IGHE, CD200R1, CCL17, CCL22, P2RX7, IL13, IL17RB, CCR4, CCL2, CCL26, HRH4, FCER2

7.98 × 10-11 - 4.94 × 10-03

Dermatological Diseases and Conditions

 

ALOX15, PTGDR2, SELE, IGHE, VIPR2, NR1H4, CCL23, CCL17, CCL22, IL13, ADRA1D, HRH1, IL17RB, CCL2, CCR4, NT5E, CD1A, HPGD, HRH4, CYSLTR2, FCER2

1.78 × 10-09 - 6.71 × 10-03

Inflammatory Disease

 

CRLF2, NR1H4, IL1RL1, VIPR2, IL13RA2, CCL17, CCL22, HRH1, TH, COL6A1, CCL2, CD1A, HPGD, CFH, CYSLTR2, FCER2, CSF3R, ALOX15, SELE, PTGDR2, IL5RA, CCL23, IGHE, CD200R1, P2RX7, IL13, ADRA1D, GLIPR2, IL17RB, CCR4, NT5E, NLRP12, CCL26.

1.78 × 10-09 - 5.7 × 10-03

PHYSIOLOGICAL SYSTEM DEVELOPMENT AND FUNCTION

P -value

Haematological System Development and Function

 

GATA1, CRLF2, VIPR2, IL1RL1, SOCS2, IL13RA2, P2RX1, CCL17, CCL22, HRH1, NFIL3, TFF2, CCL2, CD1A, CFH, CYSLTR2, FCER2, CSF3R, ALOX15, PTGDR2, SELE, IL5RA, IGHE, CCL23, CD200R1, CD1B, ULBP1, P2RX7, IL13, ZBTB32, IL17RB, CCR4, NLRP12, NT5E, MYOCD, CCL26, CYP4A11.

4.79 × 10-12 - 6.71 × 10-03

Tissue Morphology

 

GATA1, CRLF2, VIPR2, IL1RL1, NR1H4, IL13RA2, SLC9A4, CCL22, TH, HRH1, NFIL3,TFF2, CCL2, CFH, SMPD3, FCER2, CSF3R, ALOX15, SELE, PTGDR2, IL5RA, IGHE, CD200R1, P2RX, IL13, OXT, IL17RB, CCR4, NLRP12, NT5E, FLNC, CNN1, CYP4A11.

4.79 × 10-12 - 6.49 × 10-03

Humoral Immune Response

 

HRH1,PTGDR2, NFIL3, IL5RA, IL17RB, CRLF2, CCR4, IGHE, IL1RL1, IL13RA2, IL13, HRH4, FCER2.

2.28 × 10-11 - 6.53 × 10-03

Immune Cell Trafficking

 

IL1RL1, VIPR2, SOCS2, CCL17, CCL22, HRH1, NFIL3, TFF2, CCL2, CD1A, CFH, CYSLTR2, FCER2, CSF3R, ALOX15, PTGDR2, SELE, IGHE, CCL23, CD200R1, ULBP1, CD1B, P2RX7, IL13, IL17RB, CCR4, NT5E, NLRP12, CCL26.

5.04 × 10-10 - 6.71 × 10-03

Cell-mediated Immune Response

 

PTGDR2, SELE, GATA1, CCR4, CCL2, IL1RL1, CCL23, IL13RA2, CCL17, CCL22, IL13.

1.09 × 10-08 - 5.63 × 10-03

Lymphoid Tissue Structure and Development

 

CSF3R, ALOX15, SELE, GATA1, CRLF2, IL1RL1, IL13RA2, CCL17, CCL22, P2RX7, IL13, CCL2, CCR4, NT5E, CYSLTR2

3.82 × 10-07 - 5.7 × 10-03

Digestive System Development and Function

 

TFF2, NR1H4, IL13RA2, SLC9A4, IL13

2.41 × 10-05 - 4.94 × 10-03

b. S vs. C comparison

DISEASES AND DISORDERS

P -value

Hypersensitivity Response

 

FCER2, IGHE, SELE, VIPR2.

1.76 × 10-06 - 3.31 × 10-02

Inflammatory Disease

 

FCER2, IGHE, IGKC, NT5E, SELE, VIPR2

4.64 × 10-05 - 4.10 × 10-02

PHYSIOLOGICAL SYSTEM DEVELOPMENT AND FUNCTION

P -value

Hematological System Development and Function

 

FCER2, IGHE, IGKC, SELE, NT5E, VIPR2.

1.76 × 10-06 - 4.57 × 10-02

Immune Cell Trafficking

 

FCER2, IGHE, NT5E, SELE, VIPR2.

1.76 × 10-06 - 4.57 × 10-02

c. R vs. S comparison

DISEASES AND DISORDERS

P -value

Gastrointestinal Disease

 

CCL26, IL13.

9.85 × 10-06 - 2.62 × 10-02

Hematological Disease

 

CCL26, CD1A, IL13, FCER2, IGHE, IGKC, NT5E, SELE, VIPR2.

9.85 × 10-06 - 2.62 × 10-02

PHYSIOLOGICAL SYSTEM DEVELOPMENT AND FUNCTION

P-value

Hematological System Development and Function

 

CCL26, CD1A, IL13.

2.35 × 10-05 - 4.76 × 10-02

Immune Cell Trafficking

 

CCL26, CD1A, IL13.

2.35 × 10-05 - 4.76 × 10-02