Skip to main content

Table 1 The PCR primers used for detection and qPCR of transgenic cells and mice

From: Transgenically mediated shRNAs targeting conserved regions of foot-and-mouth disease virus provide heritable resistance in porcine cell lines and suckling mice

Name

Sequence

Function

GFP-F

GGTCTTGTAGTTGCCGTCGT

Quantitate GFP in BHK-21 cells

GFP-R

TCGTGACCACCCTGACCTAC

h-actin-F

CACGCAGCTCGTTGTAGAAG

Quantitate β-actin in BHK-21 cells

h-actin-R

AGGACTCGTACGTGGGTGAC

PBL1-F

CAACATACGAGCCGGAAGCATAAA

Detect PBL in cell lines

PBL1-R

TAACAGAATCTTGACCTTGCCACA

PBR1-F

AGTCAGTCAGAAACAACTTTGGCACA

Detect PBR in cell lines

PBR1-R

ACGAATAGGTGGCCTATGGCATTATTG

PBase-F

GCCACCATGGGATGTTCTTTAG

Detect transposase in cell lines

PBase-R

GTACTCAGAAACAACTTTGGC

Q-PBR1-F

TACGCATAAACGATGACG

Quantitate copy number in cell lines

Q-PBR1-R

CAAACTAAAGGCGGAGTG

Neo-2B-F

TGACCGCTTCCTCGTGCTTT

Detect transgenic mice

Neo-2B-R

TGGGTGTTCCCGCCTAGTGA

3D-Neo-F

ATCCGACGCCGCCATCTCTA

Detect transgenic mice

3D-Neo-R

CGGAGAACCTGCGTGCAATC

NR-F

CGTTTCGCATGATTGAACAAGAT

Quantitate copy number in mice

NR-R

GTGCCCAGTCATAGCCGAAT

GI-F

GGTGGTGAATACCATGTACAAAGCT

Quantitate GAPDH as reference in mice

GI-R

CCAACACCCCCAGTCATACG

Â