Identification and characterization of a Streptococcus equi ssp. zooepidemicus immunogenic GroEL protein involved in biofilm formation
© Yi et al. 2016
Received: 19 October 2015
Accepted: 11 February 2016
Published: 18 April 2016
Streptococcus equi ssp. zooepidemicus (S. equi spp. zooepidemicus) is an opportunistic pathogen that causes major economic losses in the swine industry in China and is also a threat for human health. Biofilm formation by this bacterium has been previously reported. In this study, we used an immunoproteomic approach to search for immunogenic proteins expressed by biofilm-grown S. equi spp. zooepidemicus. Seventeen immunoreactive proteins were found, of which nine common immunoreactive proteins were identified in planktonic and biofilm-grown bacteria. The immunogenicity and protective efficacy of the S. equi spp. zooepidemicus immunoreactive GroEL chaperone protein was further investigated in mice. The protein was expressed in vivo and elicited high antibody titers following S. equi spp. zooepidemicus infections of mice. An animal challenge experiment with S. equi spp. zooepidemicus showed that 75% of mice immunized with the GroEL protein were protected. Using in vitro biofilm inhibition assays, evidence was obtained that the chaperonin GroEL may represent a promising target for the prevention and treatment of persistent S. equi spp. zooepidemicus biofilm infections. In summary, our results suggest that the recombinant GroEL protein, which is involved in biofilm formation, may efficiently stimulate an immune response, which protects against S. equi spp. zooepidemicus infections. It may therefore be a candidate of interest to be included in vaccines against S. equi spp. zooepidemicus infections.
Streptococcus equi ssp. zooepidemicus (S. equi spp. zooepidemicus) is an opportunistic pathogen that causes important economic losses in the swine industry in China and is also a threat for human health . It is indeed a major problem in China and the development of an effective vaccine is vital to circumvent the significant economic impact to the industry. Previous studies have investigated different immunogenic proteins of planktonically grown S. equi spp. zooepidemicus, including secreted and surface-associated proteins [2–4]. Mao et al. [3, 4] used the immunoproteomic technology to study the convalescent serum of mini-pigs and identified 12 membrane-associated proteins, 13 cell wall-associated proteins, and seven extracellular proteins in S. equi spp. zooepidemicus. Based on enzymatic shaving and Western blot analyses, Wei et al.  described five novel membrane-associated vaccine candidate proteins.
We recently reported that S. equi spp. zooepidemicus can form biofilms . Given that bacteria within biofilms have an increased resistance to the host defence system and antibiotics, infections caused by biofilm-producing bacteria are frequently chronic, recurrent, and resistant to antibacterial chemotherapy . Immunoprophylaxis and immunotherapy targeting biofilm-related proteins are promising new approaches for the prevention and treatment of biofilm-associated infections . The immunoproteomic technology has been successfully used to identify relevant bacterial antigens for the development of new vaccines [8, 9]. This technique might also be useful to increase our understanding of the molecular mechanisms that control biofilm formation by S. equi spp. zooepidemicus.
In the present study, immunogenic proteins expressed by biofilm-grown S. equi spp. zooepidemicus were identified using an immunoproteomic approach. The chaperonin GroEL was found to be an immunogenic protein in both biofilm- and planktonic-grown S. equi spp. zooepidemicus. The immunogenicity of the recombinant GroEL protein, the protection rate of GroEL-immunized mice, and the capacity of anti-GroEL antibodies to inhibit biofilm production by S. equi spp. zooepidemicus in vitro were also investigated.
Materials and methods
All the animal experiments were performed with the approval of the Laboratory Animal Monitoring Committee of Jiangsu Province (SYXK (SU) 2011-0036). All efforts were made to minimize animal suffering and to reduce the number of animals used.
Bacteria and culture conditions
Streptococcus equi ssp. zooepidemicus strain ATCC 35246 was initially isolated from a diseased pig in Sichuan Province, China, in 1976. The strain, which was purchased from the American Type Culture Collection (ATCC), was cultured in Todd-Hewitt broth (THB, Oxoid) and on THB agar plates. Biofilms of S. equi spp. zooepidemicus were prepared by growing bacteria in THB medium supplemented with 1% human fibrinogen (Sigma) in polystyrene Petri dishes at 37 °C for 24 h, as described previously . Quantification of biofilm production was carried out by a microtiter plate assay using crystal violet staining. S. equi spp. zooepidemicus planktonic cells grown at 37 °C for 24 h in Erlenmeyer flasks containing the above culture medium were used as the control.
Whole cell protein sample extraction
Bacterial proteins were prepared as described previously [5, 10]. Briefly, following biofilm formation, the medium containing free-floating bacteria was poured off, and the wells were washed three times with sterile PBS to remove loosely attached bacteria. The biofilms were detached by scraping, were suspended in 50 mM Tris-HC1 (pH 7.5), and were sonicated for 5 min. The sonicated biofilms were pelleted by centrifugation at 8000 × g for 5 min at 4 °C. The pellets were washed twice in 50 mM Tris-HC1 (pH 7.5) and were then resuspended in buffer (50 mM Tris–HCl, pH 7.5, 3 mM MgCl2, 50% sucrose) containing 1000 U/mL of mutanolysin (Sigma) and were incubated for 90 min at 37 °C. Spheroplasts were collected and were resuspended by sonication on ice (100 W, 90 cycles, 5 s on and 10 s off) in sonication buffer (7 M urea, 2 M thiourea, 4% 3-[(3-cholamidopropyl) dimethylammonio]-1- propanesulfonate (CHAPS), and 65 mM dithiothreitol (DTT,GE Healthcare). Spheroplasts were then incubated at 25 °C for 30 min, following which cell debris and unbroken cells were removed by centrifugation at 10 000 × g for 30 min at 25 °C. The supernatants were mixed with 10% Trichloroacetic acid (TCA) and were incubated in ice water for 30 min. The precipitated proteins were pelleted by centrifugation at 10 000 × g for 10 min at 4 °C and were washed twice with pre-chilled acetone. The final pellet was air-dried, dissolved in sample preparation solution (7 M urea, 2 M thiourea, 4% CHAPS, 65 mM DTT), incubated for 30 min at 25 °C (vortexed every 10 min), and centrifuged at 10 000 × g for 20 min at 25 °C. Prior to rehydration, the supernatants were treated with 2-D Clean-up kits (GE Healthcare) to remove contaminants that may interfere with the electrophoresis. The protein content was determined using PlusOne 2-D Quant kits (GE Healthcare).
2-D gel electrophoresis
The 2-DE (two-dimensional gel electrophoresis) was performed using the immobiline/polyacrylamide system. The isoelectric focusing (IEF) was performed using IPG DryStrips (13 cm; IPGphor; GE Healthcare). Protein samples (200 μg) were applied to the IPG strips using the in-gel sample rehydration technique according to the manufacturer’s instructions. The IEF was performed in a protein IEF cell (GE Healthcare) using a stepwise voltage gradient to 80 kVh. The strips were equilibrated for 2 × 15 min in equilibration buffer (6 M urea, 2% SDS, 30% glycerol, 50 mM Tris–HCl, pH 8.8) supplemented with 1% DTT and 4% iodoacetamide prior to running the second dimension. The SDS-PAGE was carried out vertically on 12.5% polyacrylamide gels using an Ettan DALT II system (GE Healthcare). Resolved proteins were routinely stained with Coomassie Brilliant Blue G-250 for protein identification purposes. All experiments were performed in triplicate. The reproducibility of the 2-DE was verified by running the same samples at least three times on separate gels. Three replicate gels from three independent experiments were run for each growth condition. The gels were compared using Image Master Platinum 5.0 software (GE Healthcare).
Preparation of convalescent sera
The pathogen-free mini-pigs used in this study had no history of S. equi spp. zooepidemicus infection and were found to be negative for antibodies against S. equi spp. zooepidemicus ATCC 35246 whole cells, as determined by an enzyme-linked immunosorbent assay (ELISA). Swine convalescent sera were obtained from the pigs artificially infected with live S. equi spp. zooepidemicus ATCC 35246. Pre-infection sera were used as a negative control. The protocol of Zhang and Lu  was used for the immunization procedure and immunogen preparation. Pigs were intramuscularly injected twice at 3-week interval with 1.0 × 109 CFU (Colony-Forming Units) of S. equi spp. zooepidemicus. Swine sera were collected 7 days after the booster injection, and serum IgG antibody titers were determined using a whole cell ELISA . Wells of the microplate were coated with formaldehyde-inactive S. equi spp. zooepidemicus (1.0 × 106 cells), and blocked with 5% skim milk. Two-fold serial dilutions (from 1:500 to 1:16 000) of the sera were added and the plate was incubated for 2 h. Following incubation in the presence of horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG as the secondary antibody, the color was developed by adding 3,3′,5,5′-tetramethylbenzidine (TMB) substrate (Beyotime Institute, China). Color development was recorded by reading the absorbance of 450 nm using a microtiter plate reader (Bio-Rad, USA). Sera with high titers were selected for subsequent experiments.
Protein samples from each SDS-PAGE gel were transferred onto polyvinylidene difluoride (PVDF) membranes (GE Healthcare) using a semi-dry blotting apparatus (TE77, GE Healthcare) for 2 h at 0.65 mA/cm2. After the transfer, membranes were blocked by incubation for 2 h in 100 mM Tris–HCl, 150 mM NaCl, and 0.05% Tween-20 (TBST) containing 5% skim milk. The blocked membranes were incubated with sera from convalescent mini-pigs (1:1000 dilution) for 2 h at room temperature with gentle agitation. They were then washed three times with TBST (10 min per wash) and were incubated (1 h with gentle agitation) with horseradish peroxidase-labeled Staphylococcal protein A (Boster, China) at a dilution of 1:5000 in blocking solution. The membranes were washed as before, and were incubated with 3,3′-diaminobenzidine (Tiangen, China) until the optimum color was obtained. This analysis was repeated three times for each sample.
Mass spectrometric analysis of protein spots and database searches
The Coomassie Brilliant Blue-stained spots corresponding to the immunoreactive proteins were excised from the 2-D gels and were sent to Shanghai Applied Protein Technology Co. Ltd for tryptic in-gel digestion, Matrix-Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry (MALDI-TOF–MS), and MALDI-TOF/TOF–MS. The MALDI-TOF–MS and MALDI-TOF/TOF–MS acquisition data were used in a combined search against the NCBInr protein database using MASCOT (Matrix Science), with parameter sets for trypsin digestion, one max missed cleavage, variable modification of oxidation (M), and a peptide mass tolerance for monoisotopic data of 100 ppm. The MASCOT server was originally used to search the NCBInr for peptide mass fingerprinting (PMF). The criteria used to accept protein identifications were based on PMF data, including the extent of sequence coverage, the number of peptides matched, and the score of probability. Protein identification was assigned when the following criteria were met: at least four matching peptides and sequence coverage greater than 15%.
Confirmation of the immunogenicity of selected proteins
Immunoproteins identified by MALDI-TOF/TOF MS
Protein identified a
BLASTX similarity matched protein/species/identity score
Theoretical MW/pI b
MASCOT score c
No. of peptides matched d
DNA polymerase III delta subunit
elongation factor G
chaperone protein DnaK (heat shock protein 70)
60 kDa chaperonin GroEL
30S ribosomal protein S1
3-oxoacyl-(acyl-carrier-protein) synthase II
pyridine nucleotide-disulfide oxidoreductase
oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA
elongation factor Ts
Mouse vaccination and determination of protection efficacy
Thirty-two ICR (Institute of Cancer Research) mice (4-week-old females) were randomly assigned to four groups of eight mice each. The mice in Group 1 were intramuscularly injected with 0.2 mL of recombinant GroEL protein (rGroEL; 100 µg/mL) mixed with an equivalent volume of MONTANIDE ISA 206 VG (SEPPIC, France). The mice in Group 2 were intramuscularly injected with 0.2 mL of formaldehyde-inactivated S. equi spp. zooepidemicus ATCC35246 vaccine (1 × 109 cfu/mL) combined with MONTANIDE ISA 206 VG and served as positive controls. The second booster from groups 1 and 2 were intramuscularly injected with the recombinant GroEL protein and whole-cell vaccine at day 14, respectively. The mice in group 3 were intramuscularly injected with PBS and served as negative controls. The mice in Group 4 served as blank controls. One hundred μL of orbit blood were collected from each mouse. The blood samples used to prepare the sera were obtained on days 0, 7, 14, 24, and 28. Three mice from each group were sampled at random on each date. Blood were clotted and sera were prepared by centrifugation and were stored at −20 °C for later analysis. To measure serum IgG antibody, all titers of sera were evaluated using indirect ELISA.
Two weeks after the second booster dose, the mice in groups 1–3 were inoculated intraperitoneally with 0.2 mL of bacterial suspensions (1.25 × 106 cfu/mL, approximately 5 × LD50) obtained from an 18-h culture in THB to evaluate the protection against an S. equi spp. zooepidemicus challenge [14, 15]. Another eight mice in Group 4 were injected with 0.2 mL of sterile PBS.
The effect of anti-rGroEL antibodies on biofilm formation by S. equi spp. zooepidemicus
The biofilm assay was performed as described by Zarankiewicz et al. , with modifications. A S. equi spp. zooepidemicus colony was inoculated into 5 mL of THB and was cultivated with shaking at 37 °C for 12 h (late exponential/stationary growth phase) . The culture was diluted 1:100 with fresh THB broth supplemented with 1% fibrinogen and with either 1% pooled mouse anti-rGroEL serum or 1% pooled non-immunized mouse sera from day 35. After a 2 h incubation at 4 °C, 200 µL of the mixtures (106 cell per well) was added to each well of a 96-well polystyrene microtiter plate. The plate was incubated at 37 °C for 24 h without shaking. A S. equi spp. zooepidemicus culture in THB medium containing 1% fibrinogen was used for the positive control. Uninoculated culture medium containing 1% fibrinogen was used for the negative control. Biofilms were quantified by crystal violet staining as described by Wang et al. . The medium containing free-floating bacteria was poured off and the wells were washed three times with sterile PBS. Microtiter plate wells were then stained with 200 µL of 1% (w/v) crystal violet for 10 min and washed four times with PBS to remove unbound crystal violet dye, and then air dried for 1 h. Biofilm-adsorbed crystal violet was resolubilized by adding 200 µL 95% (v/v) ethanol of each well, and the absorbance was measured at 595 nm. All the assays were performed in triplicate.
Statistical analyses were carried out using the GraphPad Software package. Survival data were assessed by Kaplan C Meier survival analysis and tested for significance by the log rank test. Other data were analyzed using the Student’s t test and the P values <0.05 were considered significant.
Identification of immunoreactive proteins
Western blot analysis of the recombinant proteins
Antibody response to vaccination with the rGroEL protein
Immunoprotection provided by the rGroEL vaccine in mice
Biofilm inhibition by the anti-rGroEL antibody in vitro
S. equi spp. zooepidemicus is associated with a wide variety of infections in many animal species, including horses, cows, swine, sheep, and dogs . More specifically, S. equi spp. zooepidemicus is the main bacterial swine pathogen in China . It could also be detected in pigs without apparent clinical signs or symptoms of infection. It has also been reported to cause zoonotic infections in humans . The disease is generally sporadic and outbreaks are usually of short duration; however in large herds the bacteria may be present for longer periods [21–24]. Previous studies have shown that S. equi spp. zooepidemicus can be isolated from previously described outbreaks in pig herds, thus suggesting that some S. equi spp. zooepidemicus strains can form dormant or persister cells that can be reactivated and cause infections [23, 25].
In other bacterial species, biofilms have been shown to play a key role in causing chronic infections [26, 27]. Grenier et al.  reported that a Streptococcus suis serotype 2 strain isolated from a case of meningitis in pigs could form a dense biofilm and suggested a correlation between biofilm formation and the establishment of infection. Bacteria with a capacity to colonize the host by forming biofilms have significant advantages in establishing persistent infections . S. equi spp. zooepidemicus has been previously reported to form biofilms; differences in gene expression and protein profiles for planktonic- and biofilm-grown bacteria were demonstrated . Attempts to efficiently control S. equi spp. zooepidemicus infections are complicated due to a lack of thorough knowledge on protective bacterial antigens. Therefore, it is important to identify antigenic components of interest for the development of a potential vaccine candidate against S. equi spp. zooepidemicus infections.
In this study, we used an immunoproteomic approach to search for immunoreactive S. equi spp. zooepidemicus proteins in biofilms. While previous studies have assessed the immunogenicity of S. equi spp. zooepidemicus using planktonic cells [3, 4], our report is the first to describe biofilm-specific proteins recognized by host antibodies. We identified seventeen immunoreactive proteins, of which nine were present in both planktonic and biofilm-grown bacteria. To our knowledge, this is the first time that the other eight immunoreactive proteins have been described in S. equi spp. zooepidemicus. The common immunoreactive proteins may be promising candidates for the development of a vaccine aimed at preventing both biofilm formation and acute S. equi spp. zooepidemicus infections. In this regard, the GroEL protein may be of high interest.
GroEL belongs to the chaperonin family of molecular chaperones. It is essential for biofilm formation in the Gram negative actinobacterium Haemophilus influenzae . GroEL in Streptococcus pneumoniae can induce high antibody titers, promote lymphocyte proliferation, and induce both humoral and cell-mediated immune responses, suggesting that it may represent a protein of therapeutic interest . A number of immunoproteomic studies have shown that GroEL is an immunogenic protein in a wide variety of bacteria, including Helicobacter pylori, Riemerella anatipestifer, Brucella spp., and E. coli [31–36]. Immunization with GroEL has also been shown to induce protection in a number of infection models. For instance, a significantly higher antibody titer was produced when mice were immunized with GroEL from Streptococcus pneumoniae, providing 50% protection rate against lethal infections . In BALB/c mice, passive immunization with GroEL from Bacillus anthracis conferred 100% protection against Bacillus anthracis infections .
A mouse model was used to investigate the immunogenicity and protective immune response of the recombinant S. equi spp. zooepidemicus GroEL protein. Based on the ELISA results, the protein elicited high antibody titers. Animal challenge experiments with the S. equi spp. zooepidemicus ATCC35246 strain showed that 75% of the immunized mice were protected, a protection rate comparable to that obtained with inactivated bacterins.
GroEL is present in several bacterial fractions, including the cytosol, cell membrane, and extracellular material . It is also the compound in the biofilm supernatant that is responsible for the anti-inflammatory effect of suppressing TNF-α production in Lactobacilli . The GroEL of S. equi spp. zooepidemicus appeared to be involved in the production of biofilm since the presence of anti-rGroEL antibodies in the culture medium inhibited biofilm formation. The GroEL may thus be a promising target for the prevention/treatment of S. equi spp. zooepidemicus biofilm-related infections. Similar results with antibody-mediated strategies to prevent biofilm formation have been published previously. Zarankiewicz et al.  reported that the presence of anti-rHsp60 (GroEL) antibodies in BHI broth medium inhibited biofilm production by Histophilus somni in vitro. They observed small biofilm particles in the presence of the anti-rHsp60 antibody, whereas large biofilm complexes were produced in the control cultures.
In conclusion, the present study identified immunoreactive proteins in S. equi spp. zooepidemicus grown in biofilms for the first time. It also brought strong evidence that the rGroEL protein is a promising candidate for the development of vaccines against S. equi spp. zooepidemicus infections.
The authors declare that they have no competing interests.
Conceived and designed the experiments: LY, YW, C-PL, H-JF. Performed the experiments: LY, ZM, H-XL, BX. Analyzed the data: LY. Contributed reagents/materials/analysis tools: LY, ZM, H-XL. Wrote the paper: LY, YW. Critically read and corrected the manuscript: DG. All authors read and approved the final manuscript.
This study was supported by grants from the National Basic Research Program (973) of China (2012CB518804), the National Natural Science Foundation of China (31172319, 31272581, 31201910), the Jiangsu Agricultural Science and Technology Innovation Fund (CX(12)3078), the Key Technology Program of Jiangsu Province (BE2013433), the Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD), the Program for Science and Technology Innovation Talents in Universities of Henan Province (14HASTIT024), the Science and Technology Research Foundation of the Henan Province Educational Committee (13A230261, 14A230003), the Science and Technology Development Project of Henan Province (142102310297), and the Foundation for University Key Teachers of the Ministry of Education of Henan Province (2013GGJS-068).
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