Table 1 Identity ratio of amino acid of glycol(G)- and nucleocapsid(N)-proteins among CarRV and sixteen VHSV isolates, SHRV, HIRRV and IHNV isolates
Virus isolates, genotype | Identity ratio between CarRV 583 (LC630942) (%)a | |
|---|---|---|
(Accession number) | G-protein | N-protein |
VHSV DK-Hededam, I (Z93412) | 45.6 | 47.8 |
VHSV DK-3592B, Ia (KC778774) | 46.2 | 47.3 |
VHSV FR-07–7, Ia (AJ233396) | 46.2 | 46.8 |
VHSV M rhabdo, Ib (Z93414) | 46.2 | 47.8 |
VHSV SE-SVA-1033-3F, Ib (AB839748) | 46.0 | 47.8 |
VHSV NO-A163-68 EG46, Ic (MN038331) | 46.2 | |
(AB672619) | 47.5 | |
VHSV GE-1.2, Ie (AY546619) | 45.6 | |
(AB672617) | 47.3 | |
VHSV 1p52, II(AY546576) | 45.4 | |
(AB672621) | 46.8 | |
VHSV 4p168, III (AB672616) | 46.4 | 46.0 |
VHSV NO-2007–50-385, III (EU547740) | 46.4 | |
(AB675945) | 46.3 | |
VHSV US Makah, IVa (U28747) | 47.2 | |
(X59241) | 44.8 | |
VHSV JF00Ehi1, IVa (AB490792) | 46.8 | |
VHSV MI03GL, IVb (DQ401193) | 46.8 | |
(DQ427105) | 46.3 | |
VHSV Goby 1–5 (AB672615) | 46.6 | 46.3 |
VHSV CA-NB00-01, IVc (EF079896) | 46.2 | |
(HQ168409) | 46.8 | |
VHSV CA-NS04-01, IVc (EF079899) | 46.4 | |
(EF079895) | 46.8 | |
SHRV (NC_000903) | 55.0 | 57.4 |
HIRRV CA 9703 (NC_005093) | 39.9 | 42.6 |
IHNV WRAC, M(L40883) | 39.3 | 44.0 |