Comparative pathogenesis of peste des petits ruminants virus strains of difference virulence

Table 2 Representation of high frequency SNPs.

	Genome positions	Nucleotides EU267273.1	Nucleotides IC89	SNP Frequencies	Amino acids EU267273.1	Amino acids IC89
N CDS	1711	TTAATT	GCAGCA	99.87
M CDS	4315	G	A^a	99.46	292R	292Q
M_F intergenic region	4446	ACCGG	TTCAC	100
	4957	ATC	AC	100
	4963	G	C	100
	4971	T	A	100
	5208	AT	CT	94.84
	5473	G	T	100
	5499	GCGATCGCC	ACAAC	99.37
	5509	AA	AGCACA	99.37
	5516	T	G	99.73
	5518	AA	ATA	97.11
F CDS	5532	AC	CG^a	100	3 T	3R
	5538	C	G^a	99.65	5P	5A
	5548	A	C^a	100	8 K	8 T
	5559	T	C^a	99.68	12F	12L
	5563	C	T^a	99.79	13S	13F
	5569	T	A^a	100	15I	15 N
	5644	G	A^a	99.7	40R	40 K
	5659	A	C^a	96.96	45Q	45P
	5661	GC	AG^a	97.75	46A	46S
	5784	C	A^a	82.69	87L	87 M
	6020	A	G	57.32
	6104	T	G	99.85
	6122	T	C	100
	6773	G	T^a	99.89	416 W	416C

	Genome positions	Nucleotides KC594074.1	Nucleotides MA08	SNP frequencies	Amino acids KC594074.1	Amino acids MA08
M_F intergenic region	5203	TCT	CCT	95.1

ISSN: 1297-9716