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Table 4 Summary statistics of proportion of farms, per farm type, and within-farm proportions of 4 batch categories, in 4 clusters determined by k-means clustering

From: Repeated cross-sectional sampling of pigs at slaughter indicates varying age of hepatitis E virus infection within and between pig farms

Cluster

Cluster 1

Cluster 2

Cluster 3

Cluster 4

Proportion of farms (N)

0.18 (38)

0.45 (94)

0.25 (51)

0.12 (25)

Proportion of organic farms (N)

0.85 (17)

0.15 (3)

0.00 (0)

0.00 (0)

Proportion of conventional farms (N)

0.12 (19)

0.48 (78)

0.28 (46)

0.12 (19)

Proportion of high health farms (N)

0.13 (2)

0.31 (5)

0.25 (4)

0.31 (5)

Proportion of HyCare farms (N)

0.00 (0)

0.80 (8)

0.10 (1)

0.10 (1)

Mean proportion of PCR−ELISA− batches (IQR)

0.03

(0.0–0.0)

0.06

(0.0–0.11)

0.03

(0.0–0.0)

0.25

(0.13–0.38)

Mean proportion of PCR+ELISA− batches (IQR)

0.00

(0.0–0.0)

0.02

(0.0–0.0)

0.02

(0.0–0.0)

0.22

(0.14–0.25)

Mean proportion of PCR+ELISA+ batches (IQR)

0.07

(0.0–0.12)

0.34

(0.29–0.43)

0.67

(0.59–0.75)

0.26

(0.13–0.38)

Mean proportion of PCR−ELISA+ batches (IQR)

0.90

(0.83–1.0)

0.58

(0.5–0.67)

0.28

(0.21–0.38)

0.27

(0.2–0.38)

Within cluster sum of squares

0.57

2.02

1.57

1.20