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Table 3 Similarity matrix for Orf1B and EsaN.

From: Orf1B controls secretion of T3SS proteins and contributes to Edwardsiella piscicida adhesion to epithelial cells

Protein

Homologous protein (% similarity)

E. piscicida

Salmonella

Shigella

Yersinia

EPEC

Orf1B

SpaM (20.8%)

Spa13 (24.1%)

YscO (32.5%)

EscO (26.4%)

EsaN

InvC (41.6%)

Spa47 (43.4%)

YscN (53.5%)

EscN (49.3%)

  1. The percentage of similar amino acid residues was calculated using MegAlign program within the DNASTAR package (DNASTAR, Madsion, USA). The corresponding protein sequences are retrieved through the following Genbank accession numbers: Orf1B (WP_034171802.1); SpaM (WP_001638823.1); Spa13 (WP_024260642.1); YscO (WP_002212952.1); EscO (WP_209292174.1); EsaN (AAX55238.1); InvC (AAA74038.1); Spa47 (AAP79012.1); YscN (AAN37557.1), and EscN (AAL57542.1).
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Veterinary Research

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