Skip to main content

Table 1 Sequences and primer pair characteristics.

From: Duck plague virus UL41 protein inhibits RIG-I/MDA5-mediated duck IFN-β production via mRNA degradation activity

Primer

Plasmid

Primer sequence (5′ → 3′)

Accession No.

P1

pcaggs-IRF7-Myc

CATCATTTTGGCAAAGAATTCGCCACCATGGCAGCGGCGGAGAGCGAAG

MG707077.1

P2

GGCAGAGGGAAAAAGATCTTCACAGGTCCTCCTCTGAGATCAGCTTCTGCTCGTCTATCTGCATGTTGTACTGCTCG

P3

pcaggs-RIG-I-Flag

CATCATTTTGGCAAAGAATTCGCCACCATGACGGCGGACGAGAAGCGG

MK636873.1

P4

AAAAAGATCTGCTAGCTCGAGCTACTTATCGTCGTCATCCTTGTAATCGATCTTATCGTCGTCATCCTTGTAATCTCCCTTATCGTCGTCATCCTTGTAATCAAATGGTGGGTACAAGTT

P5

duck RIG-I (RT-PCR)

TCTCTGTCGGTCGGATAA

KC869660.1

P6

TCATCAGGTTCTGCTTCTTC

P7

duck MDA5 (RT-PCR)

GCTGAAGAAGGCCTGGACAT

KJ451070.1

P8

TCCTCTGGACACGCTGAATG

P9

duck MAVS (RT-PCR)

AGCCCAGAAATGAACCCCAG

KX290106.1

P10

TCGAACTGCTGCTGGATGAG

P11

duck STING (RT-PCR)

CCACATCTTGATCCCGCTGA

XM_013100766.1

P12

ATTGCGTAGAGGCTGTGCTT

P13

duck TBK1 (RT-PCR)

TGATCTATGAAGGTCGGCGTTT

MG772817.1

P14

CTGCTCACTACGAAGATAGGATTCTC

P15

duck IRF7 (RT-PCR)

CGCCACCCGCCTGAAGAAGT

MG707077.1

P16

CTGCCCGAAGCAGAGGAAGAT

P17

duck IFN-β (RT-PCR)

TCTACAGAGCCTTGCCTGCAT

KM035791.2

P18

TGTCGGTGTCCAAAAGGATGT

P19

duck OASL (RT-PCR)

TCTTCCTCAGCTGCTTCTCC

KY775584.1

P20

ACTTCGATGGACTCGCTGTT

P21

duck Mx (RT-PCR)

TGCTGTCCTTCATGACTTCG

NM_001310409.1

P22

GCTTTGCTGAGCCGATTAAC

P23

UL41(RT-PCR)

TGATTTACACCGCTACCCTA

AFC61841.1

P24

TCTCACTTCTTTCAGCCATT

P25

pGPU6/GFP/Neo-shIRF7

GCTCATCGAGCAGTACAACAT

 

P26

pGPU6/GFP/Neo-shNC

TTCTCCGAACGTGTCACGT