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Table 2 In silico genotyping of 14 complete MAP genomes by using novel tandem repeats found in this study

From: Genomic diversity of Mycobacterium avium subsp. paratuberculosis: pangenomic approach for highlighting unique genomic features with newly constructed complete genomes

  MAPK_TR_1 MAPK_TR_2 MAPK_TR_3 MAPK_TR_4 MAPK_TR_5 TR Type IS1311 type
Telford 1 1 1 1 2 1 S
MAPK_JB16 1 1 3 3 3 2 B
MAPK_JJ1 1 1 3 3 3 2 B
MAPK_CN4 1 2 3 3 3 3 B
MAPK_CN9 2 1 1 3 3 4 C
MAPK_CN7 2 1 2 2 3 5 C
MAP4 2 1 2 3 3 6 C
K-10 2 1 2 3 4 7 C
E1 2 1 2 3 4 7 C
E93 2 1 2 3 4 7 C
FDAARGOS_305 2 1 2 3 4 7 C
JII-1961 2 1 2 3 4 7 C
TANUVAS 2 1 2 3 4 7 C