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Table 2 In silico genotyping of 14 complete MAP genomes by using novel tandem repeats found in this study

From: Genomic diversity of Mycobacterium avium subsp. paratuberculosis: pangenomic approach for highlighting unique genomic features with newly constructed complete genomes

 

MAPK_TR_1

MAPK_TR_2

MAPK_TR_3

MAPK_TR_4

MAPK_TR_5

TR Type

IS1311 type

Telford

1

1

1

1

2

1

S

MAPK_JB16

1

1

3

3

3

2

B

MAPK_JJ1

1

1

3

3

3

2

B

MAPK_CN4

1

2

3

3

3

3

B

MAPK_CN9

2

1

1

3

3

4

C

MAPK_CN7

2

1

2

2

3

5

C

MAP4

2

1

2

3

3

6

C

K-10

2

1

2

3

4

7

C

E1

2

1

2

3

4

7

C

E93

2

1

2

3

4

7

C

FDAARGOS_305

2

1

2

3

4

7

C

JII-1961

2

1

2

3

4

7

C

TANUVAS

2

1

2

3

4

7

C

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Veterinary Research

ISSN: 1297-9716