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Table 1 Flavobacterium strains included in this study, their GenBank-accession numbers, isolation sources, and antimicrobial resistance information

From: Comparative genomics of Flavobacterium columnare unveils novel insights in virulence and antimicrobial resistance mechanisms

F. columnare isolate Accession number Isolation source Virulence profileb Antimicrobial resistance—MIC-valuesc
Flavobacterium columnare ATCC_49512 GCA_000240075.2 Trout (Oncorhynchus mykiss), genomovar I, France Non-virulent (NV) No antimicrobial resistance detected
Flavobacterium columnare JIP P11/91a GCA_015499905.1 Trout, genomovar I, France Highly virulent (HV) No antimicrobial resistance detected
Flavobacterium columnare 04017018a GCA_015499955.1 Diseased koi carp (Cyprinus carpio), genomovar I, The Netherlands HV Oxytetracycline—8 μg/mL
Flavobacterium columnare CDI-Aa GCA_015499935.1 Koi carp, genomovar I, The Netherlands Low virulent (LV) Enrofloxacin—1 μg/mL, flumequin—8 μg/mL, oxolinic acid—12 μg/mL
  1. aIndicates the isolates for which whole-genome sequencing was performed in this study.
  2. bResults from Declercq et al. [10, 11].
  3. cResults from Declercq et al. [25].