Skip to main content

Table 1 Flavobacterium strains included in this study, their GenBank-accession numbers, isolation sources, and antimicrobial resistance information

From: Comparative genomics of Flavobacterium columnare unveils novel insights in virulence and antimicrobial resistance mechanisms

F. columnare isolate

Accession number

Isolation source

Virulence profileb

Antimicrobial resistance—MIC-valuesc

Flavobacterium columnare ATCC_49512

GCA_000240075.2

Trout (Oncorhynchus mykiss), genomovar I, France

Non-virulent (NV)

No antimicrobial resistance detected

Flavobacterium columnare JIP P11/91a

GCA_015499905.1

Trout, genomovar I, France

Highly virulent (HV)

No antimicrobial resistance detected

Flavobacterium columnare 04017018a

GCA_015499955.1

Diseased koi carp (Cyprinus carpio), genomovar I, The Netherlands

HV

Oxytetracycline—8 μg/mL

Flavobacterium columnare CDI-Aa

GCA_015499935.1

Koi carp, genomovar I, The Netherlands

Low virulent (LV)

Enrofloxacin—1 μg/mL, flumequin—8 μg/mL, oxolinic acid—12 μg/mL

  1. aIndicates the isolates for which whole-genome sequencing was performed in this study.
  2. bResults from Declercq et al. [10, 11].
  3. cResults from Declercq et al. [25].
Back to article page

Veterinary Research

ISSN: 1297-9716