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Table 2 Immune-related target genes for miRNAs

From: Exosomal miRNA profiling from H5N1 avian influenza virus-infected chickens

miRNAs

Fold change (infection/control)

Immnue related target genes

Gene symbol

Control read count

Infection read count

gga-let-7b

−3.425194

24

IGDCC3, COL4A1, COL4A2, AGO4, LRIG3, COL1A2, IL13RA1, LRIG1, MAPK6, TGFBR1, IGDCC4, COL3A1, TNFAIP2, WNT9B, SEC14L1, DCLRE1C, ERCC6, CCR6, MAP4K3, EDN1, TBKBP1, MAP3K1, MAP4K4, FGF6

8110

1943

gga-let-7 g-5p

2.2773292

14

IL13RA1, MAPK6, TGFBR1, WNT9B, SEC14L1, DCLRE1C, CCR6, ERCC6, MAP4K3, MAP3K1, EDN1, TBKBP1, MAP4K4, FGF6

146

273

gga-miR-101-3p

3.110288

21

MAP3K13, MAPK6, CD274, MAP3K9, CREB1, MAP3K4, BACH2, MAPK1, NLK, CCR2, PIK3CG, SYNCRIP, SH3GL3, MEF2A, MAPK8, HACD3, MAPKAPK5, NF1, STAT3, CAMK2D, TRAF3

5

13

gga-miR-122-5p

−2.889137

1

GREM2

127

36

gga-miR-125b-5p

−2.550591

8

IRF4, PTPN1, SMURF1, PRDM1, TSTA3, IL17RA, TRAF3IP2, IL13RA1

1001

322

gga-miR-126-5p

5.7802815

17

LIF, TRAF3, FGFRL1, FGF12, C6, C1S, FGF7, IL17A, DENND1B, FGF14, CREB1, MAPK10, GATA3, SARM1, ERAP1, GDF9, JAG1

6

29

gga-miR-128-3p

−2.500261

26

JAG1, GAB1, MAPK8IP3, NF1, ZFP36L1, DAB2IP, SH3BGRL2, NCF1, MAPK14, MAPKBP1, C1S, IL9R, WNT2, MAP2K3, ITCH, DENND1B, TSC1, SH3RF1, SETX, FGF14, TRIL, IL17RA, PTPRC, RAB20, JAK2, PRDM11

52

17

gga-miR-142-5p

2.9630095

7

IL8L1, ITCH, TAB3, SFPQ, MAP4K4, FGF10, BMP15

69

168

gga-miR-1434

−8.369591

0

 

103

10

gga-miR-193a-5p

−2.172781

1

PDCD1LG2

69

26

gga-miR-20a-5p

−2.441626

32

MAP3K2, IL1RAPL1, CD274, PDCD1LG2, TGFBR2, BPIFB3, SOS1, ITCH, GAB1, MAP3K14, IPO7, MAPK1, MAP3K9, PRDM11, TNFRSF21, FAM3C, CREB5, GPI, TGFBRAP1, SMAD6, AKT3, TOLLIP, SH3PXD2A, SH3GLB2, MAP3K5, PKD1, CAMK2D, MAP1LC3A, TNFSF11, CREB1, SAMHD1, IL17RD

24

8

gga-miR-214

2.464608

16

SOS2, IRF8, MAPK1, EPHB6, TAB3, FGF14, LIF, DMAP1, DNAJA3, CD8A, NF1, PIK3CG, SH3PXD2A, TRAF3, LACC1, CCR2

37

75

gga-miR-2188-5p

−4.285245

4

FOSB, FGF20, PAK3, JUN

84

16

gga-miR-221-3p

−3.818655

8

PRDM1, ANKHD1, FOS, TAB2, CSF1R, ERBB4, IPO7, SMURF2

19

4

gga-miR-222a

8.6921924

8

PRDM1, ANKHD1, FOS, CSF1R, TAB2, ERBB4, IPO7, SMURF2

1

8

gga-miR-24-3p

5.5548592

2

MAPKAP1, OTUD7B

51

233

gga-miR-2954

2.6033041

4

TJP2, SYK, NFIL3, CD274

50

107

gga-miR-30c-1-3p

8.5887224

7

SCG2, LIFR, TAB3, TRAF2, MAP3K3, TOLLIP, SEC14L1

3

22

gga-miR-6651-5p

−2.452306

4

HIF1A, ELMOD2, LTA4H, AvBD8

51

17

gga-miR-92-3p

−2.335071

15

SMURF1, MAP2K4, DENND1B, RORA, MAP3K20, G3BP2, SH3PXD2A, TSC1, PIK3CD, GREM2, GSN, LRRK2, DNAJB9, TRAF3, UBASH3B

703

247

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Veterinary Research

ISSN: 1297-9716