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Table 2 Marker genes in the Pathotyping-PCR.

From: Serotyping and pathotyping of Glaesserella parasuis isolated 2012–2019 in Germany comparing different PCR-based methods

Name

Gene

Final primer concentration (µM each direction)

Panel

Marker association (according to Howell et al. [15])

V1

HPS_21058

0.40

II

Virulent

V2

HPS_21059

1.37

I

Virulent

V3

HPS_21068

1.14

I

Carriage

V4

HPS_22970

0.09

I

Virulent

V5

HPS_23060

0.19

II

Carriage

V6

HPS_23300

0.40

II

Carriage

V7

HPS_23505

0.09

I

Carriage

V8

HPS_23879

0.19

II

BAPS** 4 (virulent)

V9

HPS_23887*

0.52

II

Carriage

V10

HPS_22976

0.3

I

BAPS** 4 und 5 (virulent)

  1. *Also named HPS_23387 or HPS_22887.
  2. **BAPS Bayesian Population Structure (Howell et al. [11]).
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Veterinary Research

ISSN: 1297-9716