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Table 2 Proportion of clean reads and contaminant reads that were removed.

From: Differential expression of microRNA between normally developed and underdeveloped female worms of Schistosoma japonicum

 

25d MF

25d SF

Amounts

Percentage (%)

Amounts

Percentage (%)

Total reads

9 600 000

–

9 600 000

–

High-quality reads

9 574 851

100

9 574 050

100

3′ adapter null

1879

0.02

1904

0.02

 

6190

0.06

8090

0.08

5′adapter contaminants

148 410

1.55

238 250

2.49

Smaller than 18nt

59 894

0.63

11 273

0.12

Poly(A)

102

Less than 0.01

258

Less than 0.01

Clean reads

9 358 376

97.74

9 314 275

97.29

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Veterinary Research

ISSN: 1297-9716