Table 2 The A. hydrophila strains used to search for putative effectors
From: Identification of a new effector-immunity pair of Aeromonas hydrophila type VI secretion system
Strains | Accession number | Sequence range of DUF4123-immunity | Conserved domain of putative protein | Protein ID of putative protein |
|---|---|---|---|---|
NJ-35 | NZ_CP006870 | 3 862 649–3 866 785 | DUF2235 | WP_047234910 |
J-1 | NZ_CP006883 | 3 759 517–3 763 012 | DUF2235 | WP_016349832 |
4AK4 | NZ_CP006579 | 3 417 209–3 422 000 | Colicin | WP_025327967 |
AH10 | NZ_CP011100 | 3 826 164–3 830 669 | Lipase | WP_045790457 |
JBN2301 | NZ_CP013178 | 3 873 138–3 876 633 | DUF2235 | WP_016349832 |
112 134–117 054 | Unknown | WP_139118716 | ||
D4 | NZ_CP013965 | 3 835 001–3 838 496 | DUF2235 | WP_016349832 |
112 134–117 054 | Unknown | WP_139118716 | ||
GYK1 | NZ_CP016392 | 3 750 771–3 754 266 | DUF2235 | WP_016349832 |
ML09_119 | NC_021290 | 1 315 162–1 318 657 | DUF2235 | WP_016349832 |
YL17 | NZ_CP007518 | 2 331 025–2 336 071 | DUF2235 | WP_016349832 |
AL09_71 | NZ_CP007566 | 1 314 833–1 318 328 | DUF2235 | WP_016349832 |
pc104A | NZ_CP007576 | 1 314 832–1 318 327 | DUF2235 | WP_016349832 |
AL06_06 | CP010947 | 1 271 104–1 276 922 | Colicin | WP_016349832 |
4 374 167–4 376 145 | HNH endonuclease | WP_016349832 | ||
AHNIH1 | NZ_CP016380 | 1 185 505–1 190 948 | Unknown | WP_016349832 |
2 892 361–2 897 678 | Tox-HNH-EHHH | WP_016349832 | ||
ATCC 7966T | NC_008570 | 1 215 532–1 219 858 | DUF2235 | WP_016349832 |