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Table 3 Differentially expressed microRNAs in bursae between the line 63and the line 72birds 26-days post HVT or CVI988/Rispens inoculation after hatch

From: Marek’s disease vaccines-induced differential expression of known and novel microRNAs in primary lymphoid organ bursae of White Leghorn

miRNA_ID

Line_63/Line_72

HVT-induced

Rispens-induced

log2 FC

p value

FDR

log2 FC

p value

FDR

gga-mir-1684a

−4.99

4.21E−13

1.09E−10

−6.71

8.25E−10

7.16E−08

gga-mir-193b

−1.95

9.35E−06

4.30E−04

−1.69

1.27E−03

3.29E−02

gga-mir-31

−1.70

2.61E−04

7.21E−03

   

gga-mir-499

−1.43

9.45E−06

4.30E−04

   

gga-mir-6586

3.53

1.74E−04

5.17E−03

3.29

3.42E−04

1.07E−02

gga-mir-9-1

−1.24

3.97E−09

3.41E−07

   

gga-mir-9-1*

−1.24

3.97E−09

3.41E−07

   

gga-mir-9-2

−1.24

3.97E−09

3.41E−07

   

novelMiR_102

3.83

2.23E−05

9.09E−04

3.64

3.46E−05

1.69E−03

novelMiR_117

−1.34

6.69E−05

2.16E−03

   

novelMiR_1232

−3.24

1.12E−03

2.48E−02

3.67

3.39E−05

1.69E−03

novelMiR_1241

−4.02

6.36E−06

3.28E−04

   

novelMiR_1251

−11.45

8.82E−08

5.69E−06

11.29

5.67E−101

4.43E−98

novelMiR_1279_1

−5.26

2.57E−05

9.47E−04

4.03

2.95E−07

1.77E−05

novelMiR_1279_2

−5.26

2.57E−05

9.47E−04

4.03

2.95E−07

1.77E−05

novelMiR_129_1

−1.24

3.97E−09

3.41E−07

   

novelMiR_129_2

−1.24

3.97E−09

3.41E−07

   

novelMiR_130

3.49

2.26E−04

6.48E−03

   

novelMiR_1512_1

−4.46

3.97E−09

3.41E−07

   

novelMiR_1565

−5.95

4.94E−24

1.91E−21

−6.35

4.31E−21

1.12E−18

novelMiR_1616

−2.96

1.02E−03

2.32E−02

   

novelMiR_203_4

−8.05

3.49E−04

9.31E−03

   

novelMiR_277

−2.81

1.89E−03

4.06E−02

   

novelMiR_329

3.96

4.81E−04

1.16E−02

   

novelMiR_369

−3.54

3.28E−05

1.10E−03

   

novelMiR_396

−7.10

6.58E−47

5.09E−44

   

novelMiR_434

4.13

3.85E−04

9.93E−03

   

novelMiR_443

3.88

5.57E−04

1.31E−02

   

novelMiR_451

−3.61

1.87E−05

8.05E−04

   

novelMiR_459

−4.81

4.00E−04

9.99E−03

3.62

1.98E−04

6.72E−03

novelMiR_464

−4.14

2.78E−05

9.77E−04

−4.17

3.29E−06

1.83E−04

novelMiR_483

4.10

2.31E−06

1.37E−04

   

novelMiR_488

−7.15

3.70E−08

2.60E−06

4.02

6.46E−10

6.31E−08

novelMiR_909

7.64

3.66E−06

2.03E−04

   

gga-mir-1434

   

2.42

1.25E−03

3.29E−02

gga-mir-1655

   

2.94

1.97E−03

4.80E−02

gga-mir-1798

   

3.10

1.02E−03

2.84E−02

novelMiR_145_1

   

2.86

7.47E−14

9.72E−12

novelMiR_145_2

   

2.86

7.33E−14

9.72E−12

novelMiR_215

   

−5.71

4.45E−15

8.68E−13

novelMiR_268

   

2.41

5.20E−04

1.51E−02

novelMiR_474

   

11.06

2.34E−08

1.66E−06

novelMiR_475

   

8.01

1.29E−04

5.05E−03

novelMiR_5

   

2.85

1.17E−13

1.31E−11

novelMiR_507_1

   

3.46

1.04E−04

4.27E−03

novelMiR_507_2

   

3.42

1.39E−04

5.16E−03

novelMiR_507_3

   

3.46

1.04E−04

4.27E−03

novelMiR_507_4

   

3.46

1.04E−04

4.27E−03

novelMiR_52

   

2.80

3.01E−09

2.35E−07

novelMiR_60

   

−3.19

1.59E−03

4.01E−02

novelMiR_97_1

   

1.45

2.64E−04

8.58E−03

novelMiR_97_2

   

9.08

1.97E−66

7.69E−64