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Table 2 HVT and CVI988/Rispens-induced differentially expressed microRNAs in bursae within each line (63and 72) of chickens 26-days post HVT or CVI988/Rispens inoculation after hatch

From: Marek’s disease vaccines-induced differential expression of known and novel microRNAs in primary lymphoid organ bursae of White Leghorn

miRNA_ID

HVT-induced

Rispens-induced

Rispens/HVT induced

Line_63

Line_63

Line_72

Line_63

Line_72

log2 FC

p value

FDR

log2 FC

p value

FDR

log2 FC

p value

FDR

log2 FC

p value

FDR

log2 FC

p value

FDR

novelMiR_203_4

−8.68

1.33E−06

9.62E−04

      

9.36

9.72E−27

1.04E−24

   

novelMiR_396

−6.09

2.58E−04

4.68E−02

      

6.05

1.40E−05

5.25E−04

   

novelMiR_483

3.27

1.35E−04

3.26E−02

      

−4.13

3.84E−07

1.92E−05

   

novelMiR_909

7.63

1.20E−05

4.34E−03

      

−7.67

3.48E−06

1.54E−04

   

gga-mir-205b

   

3.49

1.06E−04

6.39E−03

         

novelMiR_1232

   

3.14

7.65E−04

4.27E−02

   

3.63

4.76E−06

1.99E−04

   

novelMiR_1241

   

3.90

5.01E−06

3.49E−04

   

4.39

1.03E−09

6.46E−08

   

novelMiR_1251

   

10.77

1.60E−134

1.16E−131

−10.01

4.52E−05

3.43E−02

11.26

3.05E−192

2.29E−189

−11.45

1.80E−07

1.37E−04

novelMiR_1279_1

   

5.44

2.22E−15

2.69E−13

   

5.94

1.64E−25

1.37E−23

   

novelMiR_1279_2

   

5.44

2.22E−15

2.69E−13

   

5.94

1.64E−25

1.37E−23

   

novelMiR_145_1

   

3.12

1.37E−27

3.31E−25

   

4.02

9.52E−61

1.79E−58

   

novelMiR_145_2

   

3.12

1.32E−27

3.31E−25

   

4.02

9.00E−61

1.79E−58

   

novelMiR_215

   

−4.69

2.14E−10

1.72E−08

   

−5.10

4.76E−13

3.25E−11

3.21

1.70E−04

4.29E−02

novelMiR_459

   

5.24

5.29E−06

3.49E−04

   

4.63

3.15E−08

1.82E−06

   

novelMiR_488

   

3.06

3.05E−11

2.76E−09

   

6.79

4.75E−42

7.14E−40

   

novelMiR_5

   

3.52

5.45E−19

9.88E−17

   

4.69

7.49E−28

9.38E−26

   

novelMiR_52

   

3.21

3.74E−12

3.88E−10

   

4.11

2.74E−16

2.06E−14

   

novelMiR_100_1

         

3.35

4.03E−04

1.08E−02

   

novelMiR_100_2

         

3.35

4.03E−04

1.08E−02

   

novelMiR_1304

         

2.72

1.73E−03

4.49E−02

   

novelMiR_451

         

4.02

1.20E−07

6.43E−06

   

novelMiR_476

         

3.53

3.44E−04

9.94E−03

   

novelMiR_507_1

         

3.41

4.21E−05

1.32E−03

   

novelMiR_507_2

         

3.37

2.80E−05

1.00E−03

   

novelMiR_507_3

         

3.41

4.21E−05

1.32E−03

   

novelMiR_507_4

         

3.41

4.21E−05

1.32E−03

   

novelMiR_60

         

−3.75

1.32E−05

5.22E−04

   

novelMiR_97_1

         

1.51

2.20E−06

1.03E−04

   

novelMiR_97_2

         

9.05

1.15E−93

4.33E−91