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Figure 1 | Veterinary Research

Figure 1

From: Host-range shift of H3N8 canine influenza virus: a phylodynamic analysis of its origin and adaptation from equine to canine host

Figure 1

ML and MCC tree of the HA (A) and NA (B) segments. The ML trees were constructed using the GTR + gamma nucleotide substitution model with 1000 bootstrap replications (A: HA; B: NA). The MCC trees were reconstructed using the HKY + gamma nucleotide substitution model and lognormal relaxed clock. The skyline coalescent model length chain was set at 1 × 108 in length and resampled every 1 × 104 steps (C: HA; D: NA).

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Veterinary Research

ISSN: 1297-9716