Target or function | Sequence | Region (nt) | Reference/source |
---|---|---|---|
Detection | |||
 RVA | Forward: 5′-ACCATCTACACATGACCCTC-3′ Reverse: 5′-GGTCACATAACGCCCC-3′ | 963–982 | [62] |
 RVB | Forward: 5′-GGTTTAAATAGCCCAACCGACGC-3′ Reverse: 5′GTRTTYAAATTSGTRTTTGGCGCT-3′ | 1–94 | [19] |
 RVC | Forward: 5′-ATGTAGCATGATTCACGAATGGG-3′ Reverse: 5′-ACATTTCATCCTCCTGGGGAT-3′ Probe: 5′-VIC-GCG TAG GGG CAA ATG CGC ATG A-TAMRA-3′ |  | [19] |
RVC amplification | |||
 VP7 | G1 and G3 forward: 5′-ATG GTT TGT ACR ACA TTG TRC 3′ G1 and G3 reverse: 5′-GCC ACA TGA TCT TGT TTA CGC GTA T-3′ G6 forward: 5′-ATG GTT TGT ACA ACT TTG TAC AC AGT TT-3′ G6 reverse: 5′-GCC ACA TGA TCT TGT TTA CGC GTA TC-3′ | 1–1054 | This study |
 VP6 | G1 and G3 G6 forward: 5′-ATG GAT GTA CTT TTT TCY ATY GCG-3′ G1, G3 and G6 reverse: 5′-TTC GCC CTT AGC CAC ATA GTT CAC ATT TC-3′ | 1–1294 | This study |
 VP4 | G1, G3 and G6 forward: 5′-GGA TCA ATG GCG TCC TC-3′ G1, G3 and G6 reverse: 5′-AGC CAC ACA ATC AGT CGA TCT CCT CAC-3′ | 1–2232 | This study |
 VP2 | G1 and G3 forward: 5′-ATG ATA AGC AGG AAY AGA C-3′ G1 and G3 reverse: 5′-CAG AAT TTG AGG TCR TCA CAA GAT-3′ G6 forward: 5-ATG ATA AGC AGG AAT AGA-3′ G6 reverse: 5′-GAA TTT GAG GTC ATC ACA AGA TG-3′ | 1–2737 | This study |