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Table 1 Oligonucleotides used for mutagenesis and positions of the point mutations in strain r1_445

From: Amino acidic substitutions in the polymerase N-terminal region of a reassortant betanodavirus strain causing poor adaptation to temperature increase

Oligonucleotide sequence (5′ to 3′)a

nt substitutionb

aa substitution

AGGATTATCGCCAACGCGTCATCGCTGAGAAGAAA

A-199 → G

Iso-41 → Val

CGCGTCATCGCTGAGAAGAAACAAATTCTCCGTGATGC

G-220 → A

Val-48 → Iso

CCCGACCTCGAGGTTTCTGGGCGAATC

C-730 → T

Leu-218 → Phe

GAGGTTTCTGGGCGAATCTGATGCAGATCCTG

T-745 → A

Leu-223 → Met

GTCACCGCGATCTGTAGTTTTCTTTACACCAAGC

A-791 → T

Thr-238 → Phe

CAAGATCAGTGAGTATGGTGCTGAGTTGGAGTATATGCG

A-943 → G

Thr-289 → Ala

  1. aNucleotides used for mutagenesis are underlined.
  2. bPositions in SpSsIAusc160.03 RNA1 genome (GenBank accession no. NC_024492.1).