From: Bovine milk microbiome: a more complex issue than expected
Genus | Reads in dataset 1 | Relative abundance, % | Reads in dataset 2 | Relative abundance, % |
---|---|---|---|---|
Acinetobacter | 0 | 0 | 337 | 0.9 |
Agrobacterium | 487 | 1.9 | 270 | 0.7 |
Akkermansia | 259 | 1.0 | 0 | 0 |
Alkaliphilus | 233 | 0.9 | 6 | 0.02 |
Bacillus | 95 | 0.4 | 824 | 2.2 |
Bacteroides | 1177 | 4.5 | 11 | 0.03 |
Blautia | 2477 | 9.5 | 1062 | 2.8 |
Calothrix | 296 | 1.1 | 2 | 0.005 |
Chryseobacterium | 1 | 0.004 | 11 426 | 30.4 |
Clostridium | 623 | 2.4 | 318 | 0.8 |
Corynebacterium | 37 | 0.1 | 4516 | 12.0 |
Delftia | 0 | 0 | 499 | 1.3 |
Desulfotomaculum | 3 | 0.01 | 1405 | 3.7 |
Desulfovibrio | 541 | 2.1 | 5 | 0.01 |
Dysgonomonas | 364 | 1.4 | 171 | 0.5 |
Enhydrobacter | 0 | 0 | 884 | 2.4 |
Enterococcus | 447 | 1.7 | 7176 | 19.1 |
Fibrobacter | 565 | 2.2 | 0 | 0 |
Flavobacterium | 46 | 0.2 | 443 | 1.2 |
Lachnospira | 289 | 1.1 | 104 | 0.3 |
Lactobacillus | 303 | 1.2 | 1 | 0.002 |
Legionella | 6 | 0.02 | 199 | 0.5 |
Leptotrichia | 0 | 0 | 808 | 2.2 |
Candidatus Methylacidiphilum | 1120 | 4.3 | 0 | 0 |
Methylobacterium | 0 | 0 | 352 | 0.9 |
Microbacterium | 0 | 0 | 181 | 0.5 |
Mycobacterium | 0 | 0 | 308 | 0.8 |
Neisseria | 0 | 0 | 934 | 2.5 |
Oscillospira | 719 | 2.8 | 0 | 0 |
Oxalobacter | 1 | 0.004 | 262 | 0.7 |
Paludibacter | 312 | 1.2 | 103 | 0.3 |
Parabacteroides | 0 | 0 | 161 | 0.4 |
Parapedobacter | 249 | 1.0 | 0 | 0 |
Paraprevotella | 671 | 2.6 | 2 | 0.005 |
Pedobacter | 629 | 2.4 | 120 | 0.3 |
Pelomonas | 0 | 0 | 156 | 0.4 |
Phascolarctobacterium | 357 | 1.4 | 0 | 0 |
Porphyromonas | 454 | 1.7 | 3 | 0.008 |
Prevotella | 1081 | 4.2 | 146 | 0.4 |
Propionicimonas | 0 | 0 | 387 | 1.0 |
Pseudobutyrivibrio | 282 | 1.1 | 0 | 0 |
Pseudomonas | 204 | 0.8 | 349 | 0.9 |
Ralstonia | 87 | 0.3 | 181 | 0.5 |
Ruminococcus | 623 | 2.4 | 60 | 0.2 |
Slackia | 312 | 1.2 | 1 | 0.003 |
Sphingobacterium | 2587 | 10.0 | 133 | 0.4 |
Sphingomonas | 245 | 0.9 | 142 | 0.4 |
Staphylococcus | 466 | 1.8 | 246 | 0.7 |
Streptococcus | 247 | 1.0 | 3 | 0.008 |
Tepidimonas | 0 | 0 | 373 | 1.0 |
Treponema | 2760 | 10.6 | 0 | 0 |
Trichococcus | 3 | 0.01 | 375 | 1.0 |
Total amount of reads in the sample | 25,961 | 37,527 |