Skip to main content

Table 3 qPCR verification of differentially expressed genes in the mutant strain Yb2Δ gldM and complementation strain cYb2Δ gldM

From: Riemerella anatipestifer GldM is required for bacterial gliding motility, protein secretion, and virulence

Gene locusa

Description of genes

2−ΔΔCt

Yb2ΔgldM

cYb2ΔgldM

AS87_RS00230 b

PorT protein

3.5925

1.472

AS87_RS02915

Hypothetical protein

2.445

1.3755

AS87_RS09140

Hypothetical protein

2.0875

1.2058

AS87_RS09480

Twitching motility protein PilT

2.06

1.2397

AS87_RS02755

Hypothetical protein

2.0533

0.9432

AS87_RS08665

Tat pathway signal sequence domain-containing protein

2.03

1.3947

AS87_RS09585

Hypothetical protein

1.6533

1.1028

AS87_RS08925

SusC/RagA family TonB-liked outer membrane protein

1.4225

1.6531

AS87_RS08050

Carbohydrate-bonding protein

1.3875

0.8593

AS87_RS04485

Cbb3-type cytochrome oxidase component FixQ

1.35

1.021

AS87_RS07185

Hypothetical protein

1.28

1.0352

AS87_RS09360

Hypothetical protein

1.2725

1.1408

AS87_RS05780

Hypothetical protein

1.12

0.8526

AS87_RS05060

Hypothetical protein

1.0733

0.7474

AS87_RS10475

Hypothetical protein

1.0233

0.8745

AS87_RS08045

RagA family TonB-liked outer membrane protein

0.985

1.2256

AS87_RS00555

RNA polymerase sigma24 factor

0.98

1.0867

AS87_RS08885

Hypothetical protein

0.947

1.591

AS87_RS09380

Hypothetical protein

0.945

1.0497

AS87_RS01535

Hypothetical protein

0.93

1.2226

AS87_RS05020

Hypothetical protein

0.9175

0.895

AS87_RS09995

Hypothetical protein

0.8825

1.4948

AS87_RS08585

ABC transporter

0.8425

1.5157

AS87_RS00880

ABC transporter related protein

0.6175

0.9659

AS87_RS08470 b

Gliding motility protein GldN

0.615

0.7813

AS87_RS07850

Hypothetical protein

0.47

0.9075

AS87_RS01360

Hemolysin D

0.34

0.5586

AS87_RS01365

Hypothetical protein

0.33

0.8645

AS87_RS01350

Heavy metal efflux pump, CzcA family

0.295

0.7846

AS87_RS01355

Transporter

0.225

0.6925

  1. aBased on the R. anatipestifer Yb2 genome (accession number: CP007204).
  2. bThese genes encode T9SS components.