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Table 2 Primers used for immune gene analysis

From: Piscine orthoreovirus subtype 3 (PRV-3) causes heart inflammation in rainbow trout (Oncorhynchus mykiss)

Gene

Primer sequences

Amplicon length

Reference

Gene Bank No.

Elongation Factor (EF1a)

GATCCAGAAGGAGGTCACCA

TTACGTTCGACCTTCCATCC

150

[43]

AF498320.1

Mx

AGCTCAAACGCCTGATGAAG

ACCCCACTGAAACACACCTG

142

[43]

NM_001171901

Viperin

ACGACCTCCAGCTCCCAAGT

GTCCAGGTGGCTCTTCCTGC

173

[43]

AF076620.1

Interferon type 1

AAAACTGTTTGATGGGAATATGAAA

TGTTTCAGTCTCCTCTCAGGTT

141

[43]

NM_001124531

Interferon gamma

CAAACTGAAAGTCCACTATAAGATCTCCA

GGTCCAGCCTCTCCCTCAC

188

[44]

FM864345.1

CD-4

CCTGCTCATCCACAGCCTAT

CTTCTCCTGGCTGTCTGACC

111

[43]

AY973030.1

CD-8 alpha

AGTCGTGCAAAGTGGGAAAG

GGTTGCAATGGCATACAGTG

123

[43]

NM_001124263