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Table 9 Differential expression profile of genes related to Th1 and Th2 cell differentiation pathways in peritoneal exudate cells from cats with FIP compared to peritoneal cells from healthy cats

From: Characterization of peritoneal cells from cats with experimentally-induced feline infectious peritonitis (FIP) using RNA-seq

Gene symbol

Description

Log2FC

P adjusted

KEGG Th1 polarization

 IFNG

Interferon, gamma

6.02974

7.48E−10

 IL12B

Interleukin 12B

3.83086

2.91E−06

 IL12RB1

Interleukin 12 receptor, beta 1

3.82454

2.62E−20

 IL12RB2

Interleukin 12 receptor, beta 2

3.22364

3.50E−08

 STAT1

Signal transducer and activator of transcription 1, 91 kDa

2.58559

2.72E−11

 TYK2

Tyrosine kinase 2

2.52411

8.23E−09

 TBX21

T-box 21

2.49393

0.00033

 JAK2

Janus kinase 2

1.93023

4.96E−07

 MAML1

Mastermind-like 1 (Drosophila)

1.82799

4.14E−06

 RBPJL

Recombination signal binding protein for immunoglobulin kappa J region-like

1.67996

0.22008

 RELA

v-rel avian reticuloendotheliosis viral

1.48184

0.00019

 STAT4

Signal transducer and activator of transcription 4

1.46177

0.00289

 IFNGR1

Interferon gamma receptor 1

0.46379

0.39809

 DLL1

Delta-like 1 (Drosophila)

-2.74765

1.65E −10

 NOTCH3

Notch 3

-4.00499

4.20E −15

KEGG Th2 polarization

 IL6a

Interleukin 6

4.86971

0.00071

 IL2RG

Interleukin 2 receptor, gamma

4.52368

7.33E−20

 PRDMIa

Blimp-1, PR domain containing 1, with ZNF domain

3.77121

5.13E−10

 CD40a

TNFSF5, tumor necrosis factor super family 5

3.36350

1.65E−17

 IL4R

Interleukin 4 receptor

2.8196

7.44E−13

 BAFFa

TNFS13B, tumor necrosis factor super family 13B

1.7417

4.41E−06 b

 GATA3

GATA binding protein 3

1.7299

0.01676

 RBPJL

Recombination signal binding protein for immunoglobulin kappa J region-like

1.6799

0.22008

 IL2RA

Interleukin 2 receptor, alpha

0.3470

0.67473

 STAT6

Signal transducer and activator of transcription 6, interleukin-4 induced

0.1629

0.75754

IL4

Interleukin 4

0

0.01694

NOTCH2

Notch 2

0.1502

0.58684

 MAML3

Mastermind-like 3 (Drosophila)

0.7689

0.02175

 JAG2

Jagged 2

−2.34773

6.33E −10

  1. Table was produced based on KEGG Th1 and Th2 cell differentiation pathway (KEGG map04658). Genes in italics were significantly up-regulated and Underlined genes were significantly down-regulated (P < 0.05).
  2. aGenes added to KEGG Th2 cell polarization pathway based on FIP literature.
  3. b Slightly below > 2.0 Log2FC but P value highly significant.