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Table 1 Candidate target genes for differentially expressed microRNA (miRNA) in PPRV- versus mock-infected goat PBMC

From: MicroRNA expression profiling of goat peripheral blood mononuclear cells in response to peste des petits ruminants virus infection

miRNA name Up down regulation P value Target gene
chi-miR-1 DOWN 0 TLR4, CD84, LOC108635363, LOC102182927, JKAMP, TNFRSF9, IL4R, TAL1, BMF, TRAF3, IFNGR1, IL2RG, TRAF5, HSPA13, IGSF10
chi-miR-143-3p DOWN 1.86E−290 NECTIN4, IKBKG, IL4R
chi-miR-323a-3p UP 6.59E−241 IRF3
chi-miR-485-5p UP 1.06E−45 NECTIN4, LOC102182927, CSF2RB
chi-miR-1291 UP 6.33E−259 TMEM173, IFNAR1, TRADD, TCP11L1, CDON
novel_mir3 DOWN 0 SLAMF6, TMEM173, CCAR2, NECTIN4, PBX1, LOC108637844, IL17B, TRIL, GDF2, NFATC3, CD6, LOC106503960, BCL11A, LOC108635335, APAF1, IFRD1, ISLR2, TLR4, IL1RAP, HSPA2, IRF2BPL, NFKB2, IRAK1
novel_mir85 UP 0 IL1RAP, STAM2, TNFSF13B, TLR9
novel_mir218 DOWN 9.37E−14 IL23A, TAL2, INSIG1, CD82, SLAM
chi-miR-150 UP 0 LOC102172159, SLC13A4, IGFLR1, TLR6, RTP1, ITGB1
novel_mir70 UP 0 TLR4, JAM2, IL1RAP, HSPA2, MTOR, ITGAV, STAM2, TNFSF13B, TLR9
chi-miR-30b-3p DOWN 4.26E−48 SRP19, IL22RA1, SOCS5, LOC102170232, LOC102178826, TMEM173, AREL1, IL18BP, IGF2BP3
novel_mir330 DOWN 1.09E−10 PBXIP1, SOCS2, ACKR1, TNIK, CD244, NCR1, LOC102182927, CASP8, ATG9A, TNIK
chi-miR-671-5p UP 8.28E−63 CADM2, APAF1, TMEM173, IGF2
chi-miR-182 UP 8.31E−304 IL10, TNFRSF18, BCL11B, LOC106503930, BAX
chi-miR-155-3p UP 4.01E−197 PBXIP1, NFKBIA