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Table 1 Primers used for validation of differentially expressed (DE) genes in Mycoplasma suis -infected pigs by quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR)

From: RNA-Seq based transcriptome of whole blood from immunocompetent pigs (Sus scrofa) experimentally infected with Mycoplasma suis strain Illinois

 

Gene symbol

Gene description

Primer forward (5′–3′)

Primer reverse (5′–3′)

Amplicon length (bp)

Reference gene

GAPDH

 

TTGGCTACAGCAACAGGGTG

CAGGAGATGCTCGGTGTGTT

166

DE genes

ISG15

ISG15 ubiquitin-like modifier

ATGTGCTTCAGGATGGGGTG

AGGATGCTCAGTGGGTCTCT

100

 

IL22RA2

Interleukin 22 receptor, alpha 2

ACCAGCAACAGCAGCATCTA

TGAGTGCATCCCAGCCAAG

177

 

CD274

CD274 molecule

TTACCCAGAGGCCGAAGTCA

TCCTCTCTCTGGGAACTGGT

87

 

BCL2L14

BCL2-like 14 (apoptosis facilitator)

TGCCTACAGGGTTCCGTTTC

TTCGTGGTCTAAGCGCTGTT

113

 

CCR5

Chemokine (C-C motif) receptor 5

CAGTGGGTCTAACAGGCTGG

GCGTCTGACGATGTGCTTTC

151

 

CD180

CD180 molecule

TGCTCATCGTCCTGCTCATTT

CCAGCTCCAGGAACCAATCT

178

 

AIF1

Allograft inflammatory factor 1

GCGAGAGAACAGGAAAAGCC

AGCCCCTTCAATTCCACCAC

100

 

IL15

Interleukin 15

GCTCATCCCAATTGCAAAGT

TTCCTCCAGCTCCTCACATT

189 [37]

 

PTPRO

Protein tyrosine phosphatase, receptor type, O

AAGCACCAGGACGACTTAGC

AACCCCAAAACTCAGCCCAA

174

 

TLR8

Toll-like receptor 8

CGGAAGGCTTGTTTTGGCAA

CGACCAAACATCACCGAGGA

112