Table 1 Information of the 30 sequenced S. suis serotype 9 strains included in this study
Country | Strains ID | MCG | ST | Source | Organ | Year of isolation | Genome accession no. | mrp | epf | sly | cps type |
|---|---|---|---|---|---|---|---|---|---|---|---|
Spain | 40 | 3 | ST125 | Diseased pig (meningitis) | Brain | 1999 | SRS1750970 | NA1 | − | + | 1 |
C04/1236-03L1 | 3 | ST123 | Diseased pig (meningitis | Brain | 2004 | SRS1750971 | NA1 | − | + | 1 | |
746/02 | 3 | ST125 | Diseased pig (meningitis) | Brain | 2002 | SRS1750972 | NA1 | − | + | 1 | |
BA05/00440-03 | 3 | ST123 | Diseased pig (meningitis) | Brain | 2005 | SRS1750973 | NA1 | − | + | 1 | |
BA05/00094-01Z1 | 3 | ST123 | Diseased pig (meningitis) | Brain | 2005 | SRS1750974 | NA1 | − | + | 1 | |
C04/1208/01C1 | 3 | ST123 | Diseased pig (meningitis) | Brain | 2004 | SRS1750975 | NA1 | − | + | 1 | |
C04/1428-04P1 | 3 | ST791 | Diseased pig (pneumonia) | Lung | 2004 | SRS1750976 | NA1 | − | + | 1 | |
Brazil | 1135/10 | 7-3 | ST730 | Diseased pig (septicemia) | Spleen | 2010 | SRS1750977 | – | − | − | 1 |
1136/10 | 7-3 | ST730 | Diseased pig (meningitis) | Brain | 2010 | SRS1750978 | – | − | − | 1 | |
1016/10 | 1 | ST16 | Diseased pig (meningitis) | Brain | 2010 | SRS1750979 | NA2 | − | + | 1 | |
Thailand | 1584695 | 1 | ST16 | Patient (septicemia) | Blood | 2013 | SRS1751398 | NA2 | − | + | 1 |
Canada | 89-289 | 7-3 | ST731 | Diseased pig (pneumonia) | Lung | 1989 | SRS1750983 | – | − | − | 2 |
1509635 | N | ST732 | Diseased pig (pneumonia) | Lung | 2013 | SRS1751384 | – | − | − | 1 | |
1439272 | 7-1 | ST788 | Diseased pig (pneumonia) | Lung | 2012 | SRS1751385 | NA3 | − | − | 1 | |
1398038 | 7-1 | ST788 | Diseased pig (septicemia) | Spleen | 2012 | SRS1751386 | NA3 | − | − | 1 | |
1358915 | 4 | ST733 | Diseased pig (septicemia) | Spleen | 2012 | SRS1751387 | EU | − | − | 1 | |
1275845 | 7-2 | ST734 | Diseased pig (meningitis) | Brain | 2011 | SRS1751389 | – | − | − | 2 | |
1273590 | 7-3 | ST622 | Diseased pig (pneumonia) | Lung | 2011 | SRS1751390 | – | − | + | 1 | |
1135776 | 7-1 | ST788 | Diseased pig (pneumonia) | Lung | 2009 | SRS1751391 | NA3 | − | − | 1 | |
1137833 | 7-3 | ST621 | Diseased pig (meningitis) | Brain | 2009 | SRS1751392 | – | − | + | 1 | |
1130349 | 7-1 | ST788 | Diseased pig (meningitis) | Brain | 2009 | SRS1751393 | NA3 | − | − | 1 | |
1129705 | 7-1 | ST788 | Diseased pig (meningitis) | Brain | 2008 | SRS1751394 | NA3 | − | − | 1 | |
1092236 | N | ST54 | Diseased pig (meningitis) | Brain | 2008 | SRS1751396 | EU | − | + | 1 | |
1388970 | 7-3 | ST623 | Diseased pig (pneumonia) | Lung | 2012 | SRS1751399 | – | − | − | 2 | |
1679718 | 7-3 | ST621 | Diseased pig (pneumonia) | Lung | 2014 | SRS1751400 | – | − | + | 1 | |
74911-8 | 7-2 | ST735 | Diseased pig (septicemia) | liver | 2015 | SRS1751402 | – | − | − | 1 | |
1778687 | 7-3 | ST789 | Diseased pig (septicemia) | Spleen | 2015 | SRS1751403 | – | − | − | 1 | |
1803662 | 7-3 | ST622 | Diseased pig (septicemia) | liver | 2015 | SRS1751404 | – | − | + | 1 | |
1808171 | 7-3 | ST220 | Diseased pig (septicemia) | Spleen | 2015 | SRS1751414 | – | − | − | 2 | |
1814305 | 7-3 | ST790 | Diseased pig (meningitis) | Brain | 2015 | SRS1751415 | – | − | − | 1 |