Table 3 Details of antibiotic resistance ontology of Yersinia ruckeri
From: Global proteomic profiling of Yersinia ruckeri strains
Protein | Antibiotic resistance ontology | Bit score |
|---|---|---|
Bacterial regulatory, crp family protein (cyclic AMP receptor protein) | Fluoroquinolone (enrofloxacin), beta-lactam (amoxicillin), Macrolide (erythromycin) | 431.409 |
Cys regulon transcriptional activator CysB | Aminocoumarin (novobiocin) | 620.928 |
Copper-sensing two-component system response regulator CpxR | Aminoglycoside (gentamicin), aminocoumarin (novobiocin) | 389.808 |
Alanine tRNA ligase | Aminocoumarin | 1487.63 |
Transcription repair-coupling factor | Fluoroquinolone | 1938.7 |
Dihydropteroate synthase | Sulfonamide | 440.654 |
Membrane fusion protein of RND family multidrug efflux pump | Fluoroquinolone, beta-lactam, Macrolide, Rifampin, Chloramphenicol, Tetracycline, Aminocoumarin | 548.125 |
Beta-lactamase | beta-lactam (amoxicillin) | 608.601 |
Outer membrane channel protein | Fluoroquinolone, beta-lactam, Macrolide, Rifampin, Chloramphenicol, Tetracycline, Aminocoumarin | 689.878 |
Elongation factor Tu | Elfamycin | 583.178 |
Bifunctional polymyxin resistance protein ArnA | Polymyxin B | 951.814 |
DNA gyrase subunit A | Fluoroquinolone | 751.895 |
RND efflux system inner membrane transporter CmeB | Fluoroquinolone, tetracycline | 751.125 |
Isoleucine-tRNA ligase | Mupirocin | 219.55 |