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Table 1 Fold changes of differentially expressed proteins of Yersinia ruckeri strains compared to each other

From: Global proteomic profiling of Yersinia ruckeri strains

UniProt accession number

Protein

Function

SP-05 vs CSF007-82

SP-05 vs 7959-11

SP-05 vs YRNC-10

CSF007-82 vs 7959-11

CSF007-82 vs YRNC-10

7959-11 vs YRNC-10

A0A085U6V7_YERRU

Bacterioferritin

Ferric iron binding

6.8*

5.7*

6.5*

−1.2

−1.0

1.1

A0A085U4B6_YERRU

DNA protection during starvation protein

Iron ion homeostasis

3.2*

3.8*

1.9

1.2

−1.7

−2.1

A0A085U5L5_YERRU

Anti-sigma factor antagonist

Regulation of transcription

3.6*

3.7*

3.8*

1.0

1.1

1.0

A0A085U5L7_YERRU

Anti-sigma regulatory factor

Serine/threonine kinase activity

3.9*

3.9*

4.3*

−1.0

1.1

1.1

A0A085UBQ1_YERRU

Arginine deiminase

Arginine catabolic process

5.7*

5.2*

5.8*

−1.1

1.0

1.1

A0A085U605_YERRU

Amino acid transporter

Transporter activity

4.3*

4.2*

4.0*

−1.0

−1.1

−1.0

A0A085U8U0_YERRU

Phosphate-binding protein PstS

Phosphate ion transmembrane transport

3.0

3.1*

3.4*

1.0

1.1

1.1

A0A0A5FQB4_YERRU

Superoxide dismutase Cu–Zn

Superoxide dismutase activity

2.8

3.2*

3.4*

1.2

1.2

1.1

A0A0A5FMC5_YERRU

Arginine decarboxylase, catabolic

Amino acid metabolic process

7.9*

6.5*

6.2*

−1.2

−1.3

−1.0

A0A085UBP8_YERRU

Glutamate decarboxylase

Glutamate metabolic process

10.4*

8.5*

6.8*

−1.2

−1.5

−1.3

A0A0A8VE52_YERRU

Glutaminase

Glutamine metabolic process

6.7*

6.5*

8.2*

−1.0

1.2

1.3

A0A085U745_YERRU

Glucose-1-phosphate adenylyltransferase

Glycogen biosynthetic process

5.3*

5.0*

3.8*

−1.1

−1.4

−1.3

A0A085UBM7_YERRU

3-Oxoacyl-ACP reductase

Oxidoreductase

6.2*

6.1*

6.8*

−1.0

1.1

1.1

A0A085U7G0_YERRU

Uncharacterized protein

Unknown

9.1*

7.9*

9.5*

−1.2

1.0

1.2

A0A085UBQ0_YERRU

Uncharacterized protein

Unknown

5.0*

4.9*

4.3*

−1.0

−1.2

−1.2

A0A085U732_YERRU

Putative exported protein

Unknown

2.9

2.9

3.4*

1.0

1.2

1.2

  1. ANOVA was performed for UniProt database searches.
  2. * Denotes statistically significant difference according to Tukey’s honest significant difference post hoc test with FDR-adjusted p < 0.001 and fold change < −3 or > +3.
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Veterinary Research

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