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Table 1 Overview over E. coli strains used in the study

From: Escherichia coli O78 isolated from septicemic lambs shows high pathogenicity in a zebrafish model

Strain

Source

Characteristics

Reference

E. coli wildtype strains

 K46

Septicemia, lamb

O78

Tetracycline and sulfonamide resistant

Phylogenetic group Ca

[12]

 Ctr 1

Feces, healthy lamb

Phylogenetic group B2

[12]

 Ctr 2

Feces, healthy lamb

Phylogenetic group B1

[12]

 Ctr 3

Feces, healthy lamb

Phylogenetic group B2

[12]

 Ctr 4

Feces, healthy lamb

Phylogenetic group B2

[12]

 CFT073

Pyelonephritis, human

O6:K2:H1

Cytotoxic

[31], [2]

 UTI89

Cystitis-derived, human

O18:K1:H7

[32]

E. coli recombinant strains

 CFT073-ClmR

CFT073

Chloramphenicol resistant

[33]

 K46 pGEN-GFP

K46

Expresses destabilized green fluorescent protein (GFP)

This study

 Ctr 1 pGEN-GFP

Ctr 1

Expresses destabilized GFP

This study

 Ctr 2 pGEN-GFP

Ctr 2

Expresses destabilized GFP

This study

  1. aPreviously referred to as belonging to phylogenetic group A, but is now regrouped to Group C [12].