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Table 1 Primer sequences used for quantitative reverse transcriptase PCR

From: Oestrous cycle-dependent equine uterine immune response to induced infectious endometritis

Gene name

Forward primer sequence

Reverse primer sequence

Insert size (bp)

Inter-exonic

Accession number/reference

GAPDH

GCTTCCCTTCCGCACTGCTA

CTCGGCCTTGACTGTGCCAT

222

Yes

NM_001163856.1

β-Actin

CGTGGGCCGCCCTAGGCACCA

TTGGCCTTAGGGTTCAGGGGGG

243

Yes

[17]

RPL17

TACAAAGTCATGCAAATCAAGAGGT

TTGGGAGCTTTGTTCACCTGG

339

Yes

NC_009151.2

RPL27A

AGGAAGACCCGGAAACTTCG

TTTGTAGTAGCCCGATCGCACC

315

Yes

NC_009150.2

RPL30

GGCCGTCCCGCACCTAAG

ATGACCAGTTTCGCTTTGCCT

166

Yes

XM_001491150.4

RPL32

TGGTCCACAATGTCAAGGAGC

TCGTCTATTCGTTTTCTTCGCTGC

180

No

XM_001500029.4 

RPS5

TGCCATCATCAACAGTGGTCC

AGGTTTATTGGGGCTGTGGTCG

301

Yes

XM_001495360

TLR2

GTGGACGGTGTGGGTCTTAG

TGATGTCATTGGACCCCAGC

254

No

NM_001081796.1

TLR4

CTGTTACGGTGCGTCATGCT

ACCTGCAGTTCTGGGAAGTT

301

Yes

NM_001099769.1

NLRC5

CAGCTCCAGCACGGTATCAA

GCTAGTGTGGTCTTGCCCAT

377

Yes

XM_005608529.1

CCL2

CAACAACTCTCAGGCCGAA

ATCTCCTTGGCCAATATGGTCT

262

Yes

NM_001081931.1

CXCL9

AACAGTTTGCTCCAAGCCCT

CTTTTGACGAGGACGTTGCC

221

Yes

NM_001130078.1

CXCL10

CCTCTCTCTAGAACTGCACGC

GACGGTCTTGGACTCTGGATT

180

Yes

NM_001114940.1

CXCL11

GGCCCTGGAGTAAAAGCAGT

AACAGGCCGGAGAAAGTCAG

301

Yes

NM_001278930.1

EBD1

ATTTTCTCCTTGCCTTCCTCAT

GATACAAGTGCCGATCTGT

148

Yes

[45]

Lysozyme

TGGGTCTGTTTGGCCAGATG

GTGAGGTCGTGGTTCTGACA

284

Yes

XM_001494130.2 

Lipocalin 2

GACCACAGCTACAACGTCAC

TCAGCTCCTTGGTCCTCCTAT

253

Yes

XM_005605817.1

Lactoferrin

TGGCTGAACTCCAAGGCAAA

GCGAGCATCACTCTCAGGAA

216

Yes

NM_001163974.1

Uteroferrin

CCAATATGGTCCATCGCGGA

GGGGTCCATGAAGTTCCCAG

180

Yes

NM_001246672

SLPI

CTTCCCCCTCGTGCTTCTTG

CAATGGGGTCCAGGCATTTG

209

Yes

XM_005604654.1

P19

TGATGACGGCTCACAAAACG

GCACCGATCAGTTTGGGTCAG

269

Yes

NM_001082509.2

sPLA2

GTTATGGCTTCTACGGTTGCCACT

ACACCCACGTTTCTGCAGACGATA

119

Yes

NM_001100113.2

TIMP1

CTACACCCCCGCTATGGAGA

CTGGTCCGTCCACAAGCAAT

268

Yes

NM_001082515.1