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Table 2 Details of selected potential reference genes

From: The 60S ribosomal protein L13 is the most preferable reference gene to investigate gene expression in selected organs from turkeys and chickens, in context of different infection models

Gene/symbol

Protein

Physiological functions

Accession number for chicken

Accession number for turkey

Primer and probe sequences (F-forward primer; R-reverse primer; P-probe)

TFRC

Transferrin receptor protein

Cellular uptake of iron

NM_205256.2

XM_003209136.2

F:AGCTGTGGGTGCTACTGAA

R:GGCAGAAATCTTGACATGG

P:HEX-CTCTGCCATGCTGCATGCCA-BHQ1

TBP

Binding protein TATA box

Transcription factor

NM_205103.1

XM_010707033.1

F:CTGGGATAGTGCCACAGCTA

R:GCACGAAGTGCAATGGTTT

P:ROX-TGCAACCAAGATTCACCGTGGA-BHQ2

HPRT1

Hypoxanthine–guanine phosphoribosyl-transferase I

Enzyme in the purine pathway

NM_204848.1

XM_010715191.1

F:GCTCATCATGGACAGGACAG

R:CACAGAGAGCTACAATGTGGTG

P:CY5-TGCCCTTCATAATTTCACGTGCCA-BHQ3

VIM

Vimentin

Cytoskeletal component responsible for maintaining cell integrity

NM_001048076.1

XM_010712706.1

F-TGAGTCCCTGCAAGAAGAAA

R:CAGGGCAGCAGTAAGATCAG

P:ROX-TCCGGGAACTGCAGGCTCAA-BHQ2

RPS7

40S acidic ribosomal protein S7

Small ribosomal subunit

XM_004940516.1

NM_001285787.1

F-TGGTATATCCCAGGCTCTCC

R-TCAGCTGAGGAACTGGTACG

P:FAM-TCAACTCCCGCAGCTGAGCC-TAM

RPL13

60S ribosomal protein L13

Large ribosomal subunit

NM_204999.1

XM_010718177.1

F:GGAGGAGAAGAACTTCAAGGC

R:CCAAAGAGACGAGCGTTTG

P:HEX-CTTTGCCAGCCTGCGCATG-BHQ1

HMBS

Hydroxymethyl-bilane synthase

Production of heme

XM_417846.5

XM_010723546.1

F:CCTGCCAACTTCTCTTCCTC

R:CAACAGCATCAAGTGGGTTC

P:FAM-TGCAAATAGCACCAATGGTAAAGCCA-TAM

RPLP0

60S acidic ribosomal protein P0

Large ribosomal subunit

NM_204987.2

XM_003211079.2

F-CAATGGCAGCATTTACAACC

R:CAGGAAACGCTTGTGCAG

P:CY5-TCTCCTCAGTGATGTCCAGCACTTCA-BHQ3