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Table 4 SSRs related to disorders of nucleotide excision repair.

From: Transcriptomic analysis of the host response to an iridovirus infection in Chinese giant salamander, Andrias davidianus

Transcript_id

KEGG GENE NAME

Start BP

Repeat

End BP

Type

comp90201_c0_seq1

BLM

5420

(GCT)^4

5432

Trinucleotide

comp90201_c0_seq1

BLM

3386

(ATC)^4

3398

Trinucleotide

comp57681_c0_seq1

CDK7

43

(AT)^6

55

Dinucleotide

comp71102_c0_seq1

CUL4

944

(A)^10

954

Mononucleotide

comp107286_c0_seq1

ERCC3, XPB

2478

(G)^10

2488

Mononucleotide

comp107286_c0_seq1

ERCC3, XPB

2204

(AGC)^4

2216

Trinucleotide

comp93741_c0_seq1

ERCC4, XPF

3807

(T)^10

3817

Mononucleotide

comp91446_c0_seq12

ERCC6, CSB

3738

(AGG)^6

3756

Trinucleotide

comp91446_c0_seq15

ERCC6, CSB

3727

(AGG)^6

3745

Trinucleotide

comp81303_c0_seq1

ERCC8, CSA

66

(T)^14

80

Mononucleotide

comp33205_c0_seq1

RAD23, HR23

1046

(AGC)^4

1058

Trinucleotide

comp33042_c0_seq1

RBX1, ROC1

1

(T)^11

12

Mononucleotide

comp89984_c0_seq1

rpa

577

(G)^10

587

Mononucleotide

comp33075_c0_seq1

RPA2

191

(GGT)^4

203

Trinucleotide

comp57325_c0_seq1

RPA12

1

(G)^21

22

Mononucleotide

comp72565_c0_seq1

RPA3

59

(A)^12

71

Mononucleotide

comp56791_c0_seq1

RFC

1

(T)^13

14

Mononucleotide

comp36422_c0_seq1

RFC

1

(T)^11

12

Mononucleotide

comp37382_c0_seq1

RFC

192

(GGT)^4

204

Trinucleotide

comp53798_c0_seq1

TFIIH1, TFB1

2301

(AC)^7

2315

Dinucleotide

comp82958_c1_seq1

TFIIH2, SSL1

3

(A)^19

22

Mononucleotide