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Table 2 Primer sequences used for (q)PCR analyses

From: Fumonisins affect the intestinal microbial homeostasis in broiler chickens, predisposing to necrotic enteritis

Target

Forward primer

Reverse primer

Analysis

Reference

cpa

AGT CTA CGC TTG GGA TGG AA

TTT CCT GGG TTG TTC ATT TC

PCR

[55]

cpa

GTT GAT AGC GCA GGA CAT GTT AAG

CAT GTA GTC ATC TGT TCC AGC ATC

qPCR

[56]

netB

TGA TAC CGC TTC ACA TAA AGG T

ACC GTC CTT AGT CTC AAC AAA T

PCR

[30]

netB

TCA ATT GGT TAT TCT ATA GGC GGT A

ATA TGA AGC ATT TAT TCC AGC ACC A

qPCR

[57]

rpoA

ACA TCA TTA GCG TTG TCA GTT AAA G

GAG GTT ATG GAA TAA CTC TTG GTA ATG

PCR

[30]

rpoA

CCA TCT GTT TTT ATA TCT GCT CCA GTA

GGA AGG TGA AGG ACC AAA AAC TAT T

qPCR

[57]

  1. Sequences are presented from 5’ to 3’.