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Table 3 List of up-regulated membrane genes ( FDR  < 0.05) unique of virulent H. parasuis strains (V) or present at most in one non-virulent strain (one NV)

From: Metatranscriptomics reveals metabolic adaptation and induction of virulence factors by Haemophilus parasuis during lung infection

Locus

in vivo/ex vivo 1

Product

Unique V/one NV

HPNK_10441

in vivo/ex vivo

ABC transporter, permease protein

Unique V

HPNK_03268

in vivo

Bacteriophage tail protein GPT

Unique V

HPNK_04602

ex vivo

CDP-diglyceride pyrophosphorylase

Unique V

HPNK_01144

ex vivo

Copper-transporting P-type ATPase

Unique V

HPNK_07008

ex vivo

Exonuclease III

Unique V

HPNK_00812

in vivo/ex vivo

Hypothetical protein

One NV

HPNK_06205

in vivo/ex vivo

Hypothetical protein

Unique V

HPNK_09829

in vivo/ex vivo

Hypothetical protein

Unique V

HPNK_10446

in vivo/ex vivo

Hypothetical protein

Unique V

HPNK_09189

ex vivo

Hypothetical protein

One NV

HPNK_00632

ex vivo

Hypothetical protein

Unique V

HPNK_00572

in vivo

Hypothetical protein

Unique V

HPNK_05179

in vivo

Hypothetical protein

Unique V

HPNK_00277

in vivo

Hypothetical protein

Unique V

HPNK_08083

in vivo

Hypothetical protein

One NV

HPNK_10351

in vivo

Hypothetical protein

Unique V

HPNK_00312

in vivo

Hypothetical protein

One NV

HPNK_11566

in vivo

Hypothetical protein

One NV

HPNK_11461

in vivo

Hypothetical protein

One NV

HPNK_04137

in vivo

Hypothetical protein

One NV

HPNK_04889

in vivo

ISAs1 family transposase

One NV

HPNK_00080

in vivo

ISAs1 family transposase

One NV

HPNK_04984

in vivo

ISAs1 family transposase

One NV

HPNK_06565

in vivo/ex vivo

Na+/H+ antiporter NhaC

Unique V

HPNK_11451

ex vivo

Phage-like minor tail protein

One NV

HPNK_07568

ex vivo

Polysaccharide biosynthesis protein CapD

Unique V

HPNK_05239

in vivo

putative iron compound ABC transporter permease

Unique V

HPNK_00090

in vivo

Putative phage DNA replication protein O

One NV

HPNK_09849

in vivo

Polyketide cyclase SnoaL-like domain protein

Unique V

HPNK_07393

in vivo

Tetratricopeptide-like helical domain protein

Unique V

HPNK_07408

in vivo

Sel1 domain protein, repeat-containing protein

Unique V

HPNK_07403

in vivo

Sel1 domain protein, repeat-containing protein

Unique V

HPNK_00210

in vivo/ex vivo

Transposase, Mutator family protein

One NV

HPNK_09439

in vivo/ex vivo

VtaA1

Unique V

HPNK_01479

in vivo/ex vivo

VtaA11

Unique V

HPNK_01698

in vivo/ex vivo

VtaA2

Unique V

HPNK_07258

in vivo

VtaA3

Unique V

HPNK_10146

in vivo/ex vivo

VtaA4

Unique V

HPNK_02582

in vivo/ex vivo

VtaA7

Unique V

HPNK_01967

in vivo

VtaA8

Unique V

HPNK_10812

in vivo

VtaA9

Unique V

  1. 1up-regulated in vivo, ex vivo or in both samples (in vivo/ex vivo).