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Table 1 Proteins in localization ontology classes showing an increase in mastitic milk

From: Neutrophil extracellular traps in sheep mastitis

Accession Subcellular localizations and protein names RSC
  Cytoplasmic granule  
Q29477 Lactotransferrin 4.33
Q8VC88 Grancalcin 2.97
Q9GL30 Phospholipase B-like 1 2.95
Q9UM07 Protein-arginine deiminase type-4 2.38
Q9Y2Q0 Probable phospholipid-transporting ATPase IA 1.57
  Nucleus  
P70615 Lamin-B1 5.10
O75367 Core histone macro-H2A.1 5.03
P84227 Histone H3.2 4.83
P0C0S4 Histone H2A.Z 4.65
P16401 Histone H1.5 4.34
P52272 Heterogeneous nuclear ribonucleoprotein M 4.18
P62803 Histone H4 4.00
A7VJC2 Heterogeneous nuclear ribonucleoproteins A2/B1 3.78
O35737 Heterogeneous nuclear ribonucleoprotein H 3.71
Q92841 Probable ATP-dependent RNA helicase DDX17 3.71
Q28141 ATP-dependent RNA helicase A 3.61
Q5E9J1 Heterogeneous nuclear ribonucleoprotein F 3.54
Q8NF91 Nesprin-1 3.48
P40673 High mobility group protein B2 3.33
P07156 High mobility group protein B1 (Fragment) 3.16
Q8BJS4 SUN domain-containing protein 2 3.13
P29350 Tyrosine-protein phosphatase non-receptor type 6 3.11
Q8WN55 Polypyrimidine tract-binding protein 1 3.09
P02252 Histone H1.4 3.07
P11387 DNA topoisomerase 1 3.01
P46193 Annexin A1 2.93
Q92522 Histone H1x 2.86
P32120 Beta-arrestin-2 2.85
P13084 Nucleophosmin 2.84
P27214 Annexin A11 2.81
P51991 Heterogeneous nuclear ribonucleoprotein A3 2.71
Q13838 Spliceosome RNA helicase DDX39B 2.66
Q96KK5 Histone H2A type 1-H 2.66
P43243 Matrin-3 2.61
Q3T149 Heat shock protein beta-1 2.55
Q6AXS3 Protein DEK 2.54
Q2HJ57 Coactosin-like protein 2.48
P04256 Heterogeneous nuclear ribonucleoprotein A1 2.41
Q9CW03 Structural maintenance of chromosomes protein 3 2.41
P23196 DNA-(apurinic or apyrimidinic site) lyase 2.40
Q9UM07 Protein-arginine deiminase type-4 2.38
Q15233 Non-POU domain-containing octamer-binding protein 2.35
Q60710 SAM domain and HD domain-containing protein 1 2.35
Q3T094 Protein ETHE1, mitochondrial 2.32
P38919 Eukaryotic initiation factor 4A-III 2.30
Q8CCK0 Core histone macro-H2A.2 2.27
Q9H8H2 Probable ATP-dependent RNA helicase DDX31 2.27
P62318 Small nuclear ribonucleoprotein Sm D3 2.26
Q0VCY7 Serine/arginine-rich splicing factor 1 2.11
Q3ZBV3 Protein mago nashi homolog 2.04
Q64399 DNA topoisomerase 2-beta 2.04
Q6P2Q9 Pre-mRNA-processing-splicing factor 8 1.97
Q03252 Lamin-B2 1.90
P05126 Protein kinase C beta type 1.89
A0JN52 Splicing factor 3B subunit 3 1.89
Q00PI9 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1.89
Q3SZF8 Small nuclear ribonucleoprotein Sm D2 1.89
P60122 RuvB-like 1 1.87
P47845 Galectin-3 1.85
O35286 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 1.83
Q3T0D0 Heterogeneous nuclear ribonucleoprotein K 1.81
Q5EA36 RNA-binding protein 14 1.80
Q13247 Serine/arginine-rich splicing factor 6 1.69
P38646 Stress-70 protein, mitochondrial 1.66
A5PJZ5 Nuclear pore complex protein Nup93 1.65
Q06A98 Serine/arginine-rich splicing factor 2 1.62
P02545 Prelamin-A/C 1.57
Q5PXY7 Cellular retinoic acid-binding protein 2 O 1.54
  Mitochondrion  
P45879 Voltage-dependent anion-selective channel protein 1 4.74
P20000 Aldehyde dehydrogenase, mitochondrial 3.90
Q9Y6N5 Sulfide:quinone oxidoreductase, mitochondrial 3.69
Q9MZ13 Voltage-dependent anion-selective channel protein 3 3.43
Q9UKU0 Long-chain-fatty-acid-CoA ligase 6 3.26
P41976 Superoxide dismutase [Mn], mitochondrial 3.17
Q3T165 Prohibitin 3.11
Q05B71 CDGSH iron-sulfur domain-containing protein 2 2.91
P11024 NAD(P) transhydrogenase, mitochondrial 2.83
P31081 60 kDa heat shock protein, mitochondrial 2.55
Q9BGI1 Peroxiredoxin-5, mitochondrial 2.46
Q29RK1 Citrate synthase, mitochondrial 2.40
P23196 DNA-(apurinic or apyrimidinic site) lyase 2.40
P48818 Very long-chain specific acyl-CoA dehydrogenase, mitochondrial 2.32
Q3T094 Protein ETHE1, mitochondrial 2.32
P23004 Cytochrome b-c1 complex subunit 2, mitochondrial 2.18
Q2HJ97 Prohibitin-2 2.16
Q8WY22 BRI3-binding protein 2.12
P00829 ATP synthase subunit beta, mitochondrial 2.03
Q28852 ATP synthase subunit g, mitochondrial 1.99
A5PJZ1 Calcium-binding mitochondrial carrier protein SCaMC-1 1.85
P05631 ATP synthase subunit gamma, mitochondrial 1.81
P13620 ATP synthase subunit d, mitochondrial 1.79
P23709 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial 1.72
P31039 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 1.69
P38646 Stress-70 protein, mitochondrial 1.66
P00423 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial 1.58
Q3ZBI7 Up-regulated during skeletal muscle growth protein 5 1.52
  1. All differences were statistically significant (P < 0.05; Beta-binomial test).