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Table 1 Primers and probe used in this study

From: Piscine orthoreovirus (PRV) replicates in Atlantic salmon (Salmo salar L.) erythrocytes ex vivo

Primer/probes

Primer sequence (5’ → 3’)

Accession #

ơ3 S1-659 Fwd

TGCGTCCTGCGTATGGCACC

GU994022

ơ3 S1-801 Rev

GGCTGGCATGCCCGAATAGCA

ơ3 S1-693 Probe

FAM-ATCACAACGCCTACCT–MGBNFQ

IFNα Fwd

ACTGAAACGCTACTTCAAGAAGTTGA

AY216595

IFNα Rev

GCAGATGACGTTTTGTCTCTTTCCT

Mx Fwd

GATGCTGCACCTCAAGTCCTATTA

BT043721.1

Mx Rev

CACCAGGTAGCGGATCACCAT

RIG-I Fwd

ACGCCTTGAAGAGCTGGATA

FN178459

RIG-I Rev

CTGGCTGGACTTGTGTCCTC

PKR Fwd

CAGGATGCAACACCATCATC

EF523422.1

PKR Rev

GGTCTTGACCGGTGACATCT

  1. The quencher and reporter dye of the probes are in italic. Accession numbers are shown in the right column.