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Table 1 Primers used for PCR amplification and sequencing

From: Field and experimental data indicate that the eastern cottontail (Sylvilagus floridanus) is susceptible to infection with European brown hare syndrome (EBHS) virus and not with rabbit haemorrhagic disease (RHD) virus

Genetic marker

Primer

Primer sequence (5′-3′)

Amplified fragment length

Annealing temperature (°C)

CCR5

CCR5F

TCTACCTGCTCAACCTGGCCA

574

58

 

CCR5R

TGTTGGAGCTGCTGCAGTTA

  

CXCR4

CXCR4F

CATCTTCTTGACTGGCATAG

804

49

 

CXCR4RJ1

GCGTTAGCTGGAGTGAAAA

  

IGHG hinge region

FG12

TCAGGCCCAGACTGTAGACC

680

60

 

RE

ACGGTCCCCCCAGGAGTTCA

  

IGHGCH2

F3

GTGAGTCCCATTAGCCTCAC

830

60

 

RG31

TTGGAAGGAATCAGGACAGC

  

CytB

CytBF

TTCAAATCCTAACCGGCCTA

500

47.5

 

CytBR

AACCTAGGGCGTCCTTAATT