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Table 1 Genetic distances of P95 and P151 relative to lagomorphs for nuclear markers CCR5 , CXCR4 and IGHG -CH2 and mitochondrial marker cytochrome b

From: Detection of RHDV strains in the Iberian hare (Lepus granatensis): earliest evidence of rabbit lagovirus cross-species infection

 

CCR5

CXCR4

IGHG-CH2

cytochromeb

 

P95

P151

P95

P151

P95

P151

P95

P151

Lepus granatensis

0.0

0.0

0.0

0.0

0.0

0.0

0.6*

0.6*

Lepus europaeus

0.2

0.2

0.5

0.5

0.9

0.9

8.1*

8.1*

Lepus timidus

0.2

0.2

-

-

0.0

0.0

9.7*

9.7*

Lepus americanus

-

-

0.4

0.4

0.9

0.9

9.8*

9.8*

Lepus callotis

2.7

2.7

-

-

1.1

1.1

9.1*

9.1*

Lepus californicus

-

-

0.3

0.3

1.4

1.4

9.7*

9.7*

Lepus townsendii

0.4

0.4

0.3

0.3

-

-

9.4*

9.4*

Lepus capensis

-

-

-

-

1.1

1.1

9.7*

9.7*

Lepus saxatilis

0.0

0.0

0.3

0.3

1.1

1.1

9.8*

9.8*

Lepus castroviejoi

0.4

0.4

0.4

0.4

0.9

0.9

10.9*

10.8*

Sylvilagus brasiliensis

2.3

2.3

1.1

1.1

-

-

-

-

Sylvilagus floridanus

2.9

2.9

0.8

0.8

-

-

15.9*

16.1*

Bunolagus monticularis

5.1

5.1

1.0

1.0

-

-

14.3*

14.5*

Oryctolagus cuniculus

4.9*

4.9*

1.1*

1.1*

4.2*

4.2*

14.7*

14.9*

Ochotona princeps

18.0

18.0

8.9

8.9

-

-

19.9*

20.1*

Ochotona dauurica

-

-

8.4

8.4

-

-

20.2*

20.3*

  1. Only species with information for at least two markers are presented in the table. Values are given in percentages; “-” means lack of information and “*” means average value (obtained by the mean of the genetic distances of three randomly selected sequences for that species).
  2. GenBank accession numbers: DQ146764, DQ146763, GU047870, GU047868, GU047869, GU047871, GU047867, GU047872, DQ017768, GU047865, AM051305, AM051298, DQ017767, GU047873 (CCR5); EU258270, EU258265, EU258269, EU258271, EU258266, EU258268, EU258267, EU258273, EU258272, EU258264, EU258287, EU258292, EU258304, EU258275, EU258274 (CXCR4); AJ295217, AJ295221, AJ295216, AJ431716, AJ295220, AJ295219, AJ295218, AJ295222, AJ431717, L29172, AY386696, AJ430862 (IGHG-CH2); AY942565, HQ596476, AF157465, AY745113, HQ596473, AJ421471, HM233015, AY599076, AB687529, KF781432, KF781431, KF781430, HQ596467, AF010159, HQ596468, KF781354, HQ596464, KF781357, HQ596485, JN037375, JN037374, HM233008, AY292732, EU729261, HQ596480, AF009731, AY292730, AY942569, JN037350, AY176235, AY292724, U58939, AF034257, AY292718, U58931, AY292717, HG810783, HG810780, EU591094, EU591077, EU590965, AF273000, JF911809, EF567059 (cytochrome b).