|
Origin
|
Sampling event(s) (days after farrowing)
|
SCCmeccassette type
|
MLVA numeric codea
|
MLVA cluster or type
|
Pulsotype
|
|---|
|
Sow 1
|
d1
|
IV
|
33-55-35-1-3
|
127
|
I
|
| |
d3
|
V
|
33-57-37-6-3
|
B
|
I
|
| |
d5
|
IV
|
33-53-34-8-4
|
171
|
I
|
| |
d17
|
V
|
33-57-36-6-3
|
1
|
I
|
|
Pig 6
|
<d1, d1, d54, d88
|
V
|
33-57-37-7-3
|
B
|
I
|
| |
d3
|
V
|
33-57-36-7-3
|
B
|
I
|
| |
d7
|
V
|
31-53-35-6-3
|
152
|
I
|
| |
d5, d17, d33
|
V
|
34-59-38-8-4
|
D
|
I
|
| |
d21
|
IV
|
34-57-34-7-3
|
C
|
VII
|
|
Sow 9
|
<d1
|
IV
|
32-53-34-4-3
|
155
|
V
|
|
Pig 88
|
<d1
|
IV
|
35-48-35-8-4
|
E
|
I
|
| |
d1
|
IV
|
34-47-34-7-3
|
C
|
IV
|
| |
d3, d5, d17
|
IV
|
34-47-34-7-3
|
C
|
I
|
| |
d7
|
IV
|
34-47-33-7-3
|
36
|
I
|
| |
d21
|
IV
|
35-59-35-8-4
|
E
|
I
|
| |
d33
|
V
|
33-57-37-7-3
|
B
|
I
|
| |
d54, d88
|
V
|
34-59-38-8-4
|
D
|
I
|
| |
d172
|
V
|
26-59-38-8-4
|
139
|
I
|
- aVNTR code of the repeat region of the 5 genes clf A, clf B, sdr C, sdr E, and SIRU21.
- All isolates belonged to spa type t011. The origin, sampling event, SCCmec cassette type, the MLVA numeric code, MLVA cluster or MLVA type number in case of a non-clustered MLVA type, and pulsotype is given for all isolates of each animal. Isolates (originating from the same animal at different sampling events) with the same characteristics were grouped together).
